Department of Genetics and Microbiology, Institute of Microbiology and Biotechnology, Maria Curie Skłodowska University, Akademicka 19 St, 20-033 Lublin, Poland.
Antonie Van Leeuwenhoek. 2010 Jan;97(1):21-34. doi: 10.1007/s10482-009-9384-x. Epub 2009 Oct 11.
A multilocus phylogenetic approach was applied to elucidate the phylogeny of Astragalus cicer rhizobia derived from Poland, Ukraine, and Canada. The strains selected for the studies represented three main geographically different phenons of these bacteria. Phylogenetic analyses were performed with three chromosomal housekeeping loci (16S rRNA, atpD, glnII) and three symbiotic genes located on a plasmid (nodA, nodC, nifH). The "core" and "auxiliary" gene trees revealed that A. cicer nodule isolates were intermingled with the strains of Mesorhizobium species, which implies that they are descendents of the same ancestor as mesorhizobia and fall into the Mesorhizobium genus. The noted congruence of the housekeeping and symbiotic gene phylogenies of A. cicer microsymbionts indicates that sym loci are transferred to these bacteria through vertical transmission without a significant participation of intergeneric horizontal gene spread. All the three sym gene sequences of the Polish and Ukrainian A. cicer nodule isolates were more closely related to one another than to the corresponding sequences of the Canadian isolates. The phylogeographic patterns of the sym genes of intercontinental strains point to their relatively long, separate, evolutionary history.
采用多基因座系统发育方法阐明了源自波兰、乌克兰和加拿大的百脉根根瘤菌的系统发育。选择用于研究的菌株代表了这些细菌三个主要地理不同表型群。系统发育分析采用三个染色体管家基因座(16S rRNA、atpD、glnII)和位于质粒上的三个共生基因(nodA、nodC、nifH)进行。“核心”和“辅助”基因树表明,百脉根根瘤菌分离株与中慢生根瘤菌的菌株混在一起,这意味着它们是中慢生根瘤菌的同一祖先的后代,并归入中慢生根瘤菌属。百脉根微共生体的管家基因和共生基因系统发育的显著一致性表明,共生基因座通过垂直传递转移到这些细菌中,而没有种间水平基因传播的显著参与。波兰和乌克兰百脉根根瘤菌分离株的所有三个共生基因序列彼此之间的关系比与加拿大分离株的相应序列更为密切。洲际菌株共生基因的系统地理模式表明它们具有相对较长的、独立的进化历史。