Takeuchi Nobuto, Hogeweg Paulien
Theoretical Biology and Bioinformatics Group, Utrecht University, Utrecht, The Netherlands.
PLoS Comput Biol. 2009 Oct;5(10):e1000542. doi: 10.1371/journal.pcbi.1000542. Epub 2009 Oct 16.
Multilevel selection has been indicated as an essential factor for the evolution of complexity in interacting RNA-like replicator systems. There are two types of multilevel selection mechanisms: implicit and explicit. For implicit multilevel selection, spatial self-organization of replicator populations has been suggested, which leads to higher level selection among emergent mesoscopic spatial patterns (traveling waves). For explicit multilevel selection, compartmentalization of replicators by vesicles has been suggested, which leads to higher level evolutionary dynamics among explicitly imposed mesoscopic entities (protocells). Historically, these mechanisms have been given separate consideration for the interests on its own. Here, we make a direct comparison between spatial self-organization and compartmentalization in simulated RNA-like replicator systems. Firstly, we show that both mechanisms achieve the macroscopic stability of a replicator system through the evolutionary dynamics on mesoscopic entities that counteract that of microscopic entities. Secondly, we show that a striking difference exists between the two mechanisms regarding their possible influence on the long-term evolutionary dynamics, which happens under an emergent trade-off situation arising from the multilevel selection. The difference is explained in terms of the difference in the stability between self-organized mesoscopic entities and externally imposed mesoscopic entities. Thirdly, we show that a sharp transition happens in the long-term evolutionary dynamics of the compartmentalized system as a function of replicator mutation rate. Fourthly, the results imply that spatial self-organization can allow the evolution of stable folding in parasitic replicators without any specific functionality in the folding itself. Finally, the results are discussed in relation to the experimental synthesis of chemical Darwinian systems and to the multilevel selection theory of evolutionary biology in general. To conclude, novel evolutionary directions can emerge through interactions between the evolutionary dynamics on multiple levels of organization. Different multilevel selection mechanisms can produce a difference in the long-term evolutionary trend of identical microscopic entities.
多级选择已被视为相互作用的类RNA复制子系统中复杂性进化的一个关键因素。多级选择机制有两种类型:隐式和显式。对于隐式多级选择,有人提出复制子群体的空间自组织,这导致在涌现的介观空间模式(行波)之间进行更高层次的选择。对于显式多级选择,有人提出通过囊泡对复制子进行区室化,这导致在明确施加的介观实体(原始细胞)之间产生更高层次的进化动力学。从历史上看,这些机制因其自身的利益而被分别考虑。在这里,我们在模拟的类RNA复制子系统中对空间自组织和区室化进行了直接比较。首先,我们表明这两种机制都通过介观实体上的进化动力学实现了复制子系统的宏观稳定性,这种动力学抵消了微观实体的动力学。其次,我们表明这两种机制在它们对长期进化动力学的可能影响方面存在显著差异,这种差异发生在由多级选择产生的一种涌现的权衡情况下。这种差异是根据自组织介观实体和外部施加的介观实体之间稳定性的差异来解释的。第三,我们表明区室化系统的长期进化动力学随着复制子突变率的变化而发生急剧转变。第四,结果表明空间自组织可以允许寄生复制子中稳定折叠的进化,而折叠本身没有任何特定功能。最后,我们结合化学达尔文系统的实验合成以及一般进化生物学的多级选择理论对结果进行了讨论。总之,新的进化方向可以通过组织的多个层次上的进化动力学之间的相互作用而出现。不同的多级选择机制可以在相同微观实体的长期进化趋势上产生差异。