Rubin M R, Nguyen-Huu M C
Department of Microbiology, Columbia University, New York, New York 10032.
DNA Seq. 1990;1(2):115-24. doi: 10.3109/10425179009016039.
Two Hox-1.7 cDNAs, GPK5 and GPK6, were isolated from an adult guinea-pig kidney cDNA library by hybridization at low stringency using a Hox-1.7 cDNA probe, MH-1, cloned from mouse F9 teratocarcinoma cells. Sequence analysis of these two Hox-1.7 cDNAs showed that (a) GPK5 contains a putative initiation codon preceding an open reading frame which includes the homeo box, and may represent the complete protein coding region for the corresponding Hox-1.7 transcript; (b) the amino acids encoded by GPK6 and MH-1 are nearly identical (with two changes); (c) both adult guinea-pig kidney cDNA clones share identical homeo domains with the mouse Hox-1.7 cDNA; and (d) both adult guinea-pig kidney cDNA clones are identical in the homeo box region and in the 3' untranslated region but differ significantly starting from the 12th codon upstream from the homeo box. These data, supported by Southern blot analysis, indicate that a splice site is present 5' to the homeo box and that alternative splicing results in transcripts encoding different protein products.
通过使用从小鼠F9畸胎瘤细胞克隆的Hox - 1.7 cDNA探针MH - 1进行低严谨度杂交,从成年豚鼠肾脏cDNA文库中分离出两个Hox - 1.7 cDNA,即GPK5和GPK6。对这两个Hox - 1.7 cDNA的序列分析表明:(a)GPK5在一个包含同源异型框的开放阅读框之前含有一个推定的起始密码子,可能代表相应Hox - 1.7转录本的完整蛋白质编码区;(b)GPK6和MH - 1编码的氨基酸几乎相同(有两个变化);(c)成年豚鼠肾脏的两个cDNA克隆与小鼠Hox - 1.7 cDNA具有相同的同源异型结构域;(d)成年豚鼠肾脏的两个cDNA克隆在同源异型框区域和3'非翻译区域相同,但从同源异型框上游第12个密码子开始有显著差异。这些数据得到Southern印迹分析的支持,表明在同源异型框5'端存在一个剪接位点,并且可变剪接导致编码不同蛋白质产物的转录本产生。