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噬菌体T4溶菌酶的突变失稳与解折叠速率增加之间的相关性。

Correlation between mutational destabilization of phage T4 lysozyme and increased unfolding rates.

作者信息

Klemm J D, Wozniak J A, Alber T, Goldenberg D P

机构信息

Department of Biochemistry, University of Utah School of Medicine, Salt Lake City 84132.

出版信息

Biochemistry. 1991 Jan 15;30(2):589-94. doi: 10.1021/bi00216a038.

Abstract

The thermodynamics and kinetics of unfolding of 28 bacteriophage T4 lysozyme variants were compared by using urea gradient gel electrophoresis. The mutations studied cause a variety of sequence changes at different residues throughout the polypeptide chain and result in a wide range of thermodynamic stabilities. A striking relationship was observed between the thermodynamic and kinetic effects of the amino acid replacements: All the substitutions that destabilized the native protein by 2 kcal/mol or more also increased the rate of unfolding. The observed increases in unfolding rate corresponded to a decrease in the activation energy of unfolding (delta Gu) at least 35% as large as the decrease in thermodynamic stability (delta Gu). Thus, the destabilizing lesions bring the free energy of the native state closer to that of both the unfolded state and the transition state for folding and unfolding. Since a large fraction of the mutational destabilization is expressed between the transition state and the native conformation, the changes in folding energetics cannot be accounted for by effects on the unfolded state alone. The results also suggest that interactions throughout much of the folded structure are altered in the formation of the transition state during unfolding.

摘要

通过使用尿素梯度凝胶电泳,比较了28种噬菌体T4溶菌酶变体展开的热力学和动力学。所研究的突变在整个多肽链的不同残基处引起了多种序列变化,并导致了广泛的热力学稳定性。在氨基酸替换的热力学和动力学效应之间观察到了一种显著的关系:所有使天然蛋白质稳定性降低2千卡/摩尔或更多的替换也增加了展开速率。观察到的展开速率增加对应于展开活化能(ΔGu)的降低,其降低幅度至少是热力学稳定性降低(ΔGu)幅度的35%。因此,使稳定性降低的损伤使天然状态的自由能更接近未折叠状态以及折叠和展开的过渡态的自由能。由于大部分突变导致的稳定性降低表现在过渡态和天然构象之间,折叠能量学的变化不能仅通过对未折叠状态的影响来解释。结果还表明,在展开过程中形成过渡态时,大部分折叠结构中的相互作用发生了改变。

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