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三维极坐标表示法用于多光谱荧光寿命成像显微镜。

Three-dimensional polar representation for multispectral fluorescence lifetime imaging microscopy.

机构信息

Interdisciplinary Research Institute, Science and Technology University of Lille, USR 3078 CNRS, BCF, Villeneuve d'Ascq, France.

出版信息

Cytometry A. 2009 Dec;75(12):1007-14. doi: 10.1002/cyto.a.20802.

DOI:10.1002/cyto.a.20802
PMID:19908245
Abstract

Multispectral fluorescence lifetime imaging microscopy is a promising and powerful technique for discriminating multiply labeled samples and for detecting molecular interactions inside thick, heterogeneous, and light-scattering milieu such as tissue. The fast and correct analysis of the spectral and lifetime images constitutes a major challenge, which requires a high level of expertise. We present here a new approach that considerably simplifies this analysis avoiding complex fitting algorithm strategies and permitting a fast and visual graphical representation of the fluorescence lifetimes. By transforming the experimental data from time domain to frequency domain for each spectral channel, we calculate the multispectral polar representation and demonstrate its interest on multiply fluorescent labeled sample. We further apply it on Förster resonance energy transfer (FRET) experiments and demonstrate that FRET measurements with a high level of precision can be performed. With addition of emission wavelength as third dimension in the polar representation, autofluorescence emitted by the sample is thus clearly identified. Analysis artifacts induced by the sample or by fitting algorithm choice become then totally inexistent.

摘要

多光谱荧光寿命成像显微镜是一种很有前途和强大的技术,可用于区分多重标记的样品,并用于检测组织等厚、异质和光散射环境中的分子相互作用。快速正确地分析光谱和寿命图像是一个主要挑战,这需要高水平的专业知识。我们在这里提出了一种新方法,通过避免复杂的拟合算法策略,大大简化了这种分析,并允许快速直观地显示荧光寿命的图形表示。通过将每个光谱通道的实验数据从时域转换到频域,我们计算了多光谱极坐标表示,并证明了其在多重荧光标记样品上的应用。我们进一步将其应用于Förster 共振能量转移(FRET)实验,并证明可以进行高精度的 FRET 测量。在极坐标表示中添加发射波长作为第三维,因此可以清楚地识别样品发出的自发荧光。由样品或拟合算法选择引起的分析伪影变得完全不存在。

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Three-dimensional polar representation for multispectral fluorescence lifetime imaging microscopy.三维极坐标表示法用于多光谱荧光寿命成像显微镜。
Cytometry A. 2009 Dec;75(12):1007-14. doi: 10.1002/cyto.a.20802.
2
Spectral phasor analysis allows rapid and reliable unmixing of fluorescence microscopy spectral images.光谱相量分析可实现对荧光显微镜光谱图像的快速且可靠的解混。
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Optimized protocol of a frequency domain fluorescence lifetime imaging microscope for FRET measurements.用于荧光共振能量转移(FRET)测量的频域荧光寿命成像显微镜的优化方案。
Microsc Res Tech. 2009 May;72(5):371-9. doi: 10.1002/jemt.20665.
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Application of spectral imaging microscopy in cytomics and fluorescence resonance energy transfer (FRET) analysis.光谱成像显微镜在细胞组学及荧光共振能量转移(FRET)分析中的应用。
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Imaging FRET between spectrally similar GFP molecules in single cells.单细胞中光谱相似的绿色荧光蛋白分子间的成像荧光共振能量转移
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Quantitative linear unmixing of CFP and YFP from spectral images acquired with two-photon excitation.从双光子激发获取的光谱图像中对CFP和YFP进行定量线性解混。
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引用本文的文献

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Simple phasor-based deep neural network for fluorescence lifetime imaging microscopy.基于简单相位子的深度学习神经网络在荧光寿命成像显微镜中的应用。
Sci Rep. 2021 Dec 13;11(1):23858. doi: 10.1038/s41598-021-03060-x.
2
Non fitting based FRET-FLIM analysis approaches applied to quantify protein-protein interactions in live cells.基于非拟合的荧光共振能量转移-荧光寿命成像(FRET-FLIM)分析方法用于定量活细胞中的蛋白质-蛋白质相互作用。
Biophys Rev. 2011 Jun;3(2):63-70. doi: 10.1007/s12551-011-0047-6. Epub 2011 May 17.
3
Efficient parallel Levenberg-Marquardt model fitting towards real-time automated parametric imaging microscopy.
面向实时自动参数成像显微镜的高效并行Levenberg-Marquardt模型拟合
PLoS One. 2013 Oct 10;8(10):e76665. doi: 10.1371/journal.pone.0076665. eCollection 2013.
4
Spatio-Temporal Quantification of FRET in living cells by fast time-domain FLIM: a comparative study of non-fitting methods [corrected].活细胞中 FRET 的快速时域 FLIM 的时空定量:非拟合方法的比较研究[已更正]。
PLoS One. 2013 Jul 18;8(7):e69335. doi: 10.1371/journal.pone.0069335. Print 2013.
5
Förster resonance energy transfer microscopy and spectroscopy for localizing protein-protein interactions in living cells.用于在活细胞中定位蛋白质-蛋白质相互作用的Förster 共振能量转移显微镜和光谱学。
Cytometry A. 2013 Sep;83(9):780-93. doi: 10.1002/cyto.a.22321. Epub 2013 Jun 27.