猪腺病毒分离株NADC-1纤维头部和半乳糖凝集素样结构域的结晶
Crystallization of the head and galectin-like domains of porcine adenovirus isolate NADC-1 fibre.
作者信息
Guardado-Calvo Pablo, Llamas-Saiz Antonio L, Fox Gavin C, Glasgow Joel N, van Raaij Mark J
机构信息
Departamento de Bioquímica y Biología Molecular, Universidad de Santiago de Compostela, Spain.
出版信息
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Nov 1;65(Pt 11):1149-52. doi: 10.1107/S1744309109038287. Epub 2009 Oct 30.
Abstract
The porcine adenovirus NADC-1 isolate, a strain of porcine adenovirus type 4, has a fibre with an atypical architecture. In addition to a classical virus attachment region, shaft and head domains, it contains an additional galectin like domain C-terminal to the head domain and connected to the head domain by a long RGD-containing loop. The galectin-like domain contains two putative carbohydrate-recognition domains. The head and galectin-like domains have been independently crystallized. Diffraction data have been obtained to 3.2 angstrom resolution from crystals of the head domain and to 1.9 angstrom resolution from galectin-like domain crystals.
摘要
猪腺病毒NADC-1分离株，即4型猪腺病毒的一个毒株，其纤维具有非典型结构。除了经典的病毒附着区域、杆部和头部结构域外，它在头部结构域的C端还含有一个额外的半乳糖凝集素样结构域，并通过一个含有RGD的长环与头部结构域相连。该半乳糖凝集素样结构域包含两个假定的碳水化合物识别结构域。头部结构域和半乳糖凝集素样结构域已分别结晶。已从头部结构域晶体获得了分辨率为3.2埃的衍射数据，从半乳糖凝集素样结构域晶体获得了分辨率为1.9埃的衍射数据。
相似文献
1
Crystallization of the head and galectin-like domains of porcine adenovirus isolate NADC-1 fibre.猪腺病毒分离株NADC-1纤维头部和半乳糖凝集素样结构域的结晶
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Nov 1;65(Pt 11):1149-52. doi: 10.1107/S1744309109038287. Epub 2009 Oct 30.
2
Crystallographic structure of porcine adenovirus type 4 fiber head and galectin domains.猪腺病毒 4 型纤维头部和半乳糖凝集素结构域的晶体结构。
J Virol. 2010 Oct;84(20):10558-68. doi: 10.1128/JVI.00997-10. Epub 2010 Aug 4.
3
Sequence analysis of the fiber genomic region of a porcine adenovirus predicts a novel fiber protein.
Virus Res. 1995 Dec;39(2-3):299-309. doi: 10.1016/0168-1702(95)00079-8.
4
X-ray structure of a protease-resistant mutant form of human galectin-9 having two carbohydrate recognition domains with a metal-binding site.具有两个碳水化合物识别结构域且带有一个金属结合位点的人半乳糖凝集素-9蛋白酶抗性突变体形式的X射线结构。
Biochem Biophys Res Commun. 2017 Sep 2;490(4):1287-1293. doi: 10.1016/j.bbrc.2017.07.009. Epub 2017 Jul 4.
5
X-ray structure of a protease-resistant mutant form of human galectin-8 with two carbohydrate recognition domains.X 射线结构解析具有两个糖识别结构域的人半乳糖凝集素-8蛋白酶抗性突变体形式。
FEBS J. 2012 Oct;279(20):3937-51. doi: 10.1111/j.1742-4658.2012.08753.x. Epub 2012 Sep 11.
6
Cloning, expression, purification and crystallographic studies of galectin-11 from domestic sheep (Ovis aries).家羊（绵羊）半乳糖凝集素-11的克隆、表达、纯化及晶体学研究。
Acta Crystallogr F Struct Biol Commun. 2015 Aug;71(Pt 8):993-7. doi: 10.1107/S2053230X15010195. Epub 2015 Jul 28.
7
Crystallization and preliminary X-ray diffraction analysis of a protease-resistant mutant form of human galectin-8.人半乳糖凝集素-8蛋白酶抗性突变体形式的结晶及初步X射线衍射分析
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 May 1;65(Pt 5):512-4. doi: 10.1107/S1744309109013554. Epub 2009 Apr 24.
8
Structure of the C-terminal head domain of the fowl adenovirus type 1 long fiber.禽腺病毒1型长纤维C末端头部结构域的结构
J Gen Virol. 2007 Sep;88(Pt 9):2407-2416. doi: 10.1099/vir.0.82845-0.
9
Structural analysis of the human galectin-9 N-terminal carbohydrate recognition domain reveals unexpected properties that differ from the mouse orthologue.人半乳糖凝集素-9 N端碳水化合物识别结构域的结构分析揭示了与小鼠同源物不同的意外特性。
J Mol Biol. 2008 Jan 4;375(1):119-35. doi: 10.1016/j.jmb.2007.09.060. Epub 2007 Sep 26.
10
Structural basis of a fungal galectin from Agrocybe cylindracea for recognizing sialoconjugate.柱状田头菇真菌半乳糖凝集素识别唾液酸共轭物的结构基础
J Mol Biol. 2005 Aug 26;351(4):695-706. doi: 10.1016/j.jmb.2005.06.045.
引用本文的文献
1
Characterization of the First Genome of Porcine mastadenovirus B (HNU1 Strain) and Implications on Its Lymphoid and Special Origin.猪巨细胞病毒 B（HNU1 株）的全基因组特征及其对其淋巴样和特异性起源的影响。
Virol Sin. 2020 Oct;35(5):528-537. doi: 10.1007/s12250-020-00210-9. Epub 2020 Mar 31.
2
An adenovirus vector incorporating carbohydrate binding domains utilizes glycans for gene transfer.一种腺病毒载体，包含碳水化合物结合结构域，利用聚糖进行基因转移。
PLoS One. 2013;8(2):e55533. doi: 10.1371/journal.pone.0055533. Epub 2013 Feb 1.
3
Crystallization of the C-terminal domain of the bacteriophage T7 fibre protein gp17.噬菌体T7纤维蛋白gp17 C端结构域的结晶
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Feb 1;68(Pt 2):166-71. doi: 10.1107/S1744309111051049. Epub 2012 Jan 25.
4
Crystallographic structure of porcine adenovirus type 4 fiber head and galectin domains.猪腺病毒 4 型纤维头部和半乳糖凝集素结构域的晶体结构。
J Virol. 2010 Oct;84(20):10558-68. doi: 10.1128/JVI.00997-10. Epub 2010 Aug 4.
本文引用的文献
1
Processing of X-ray diffraction data collected in oscillation mode.振荡模式下收集的X射线衍射数据的处理。
Methods Enzymol. 1997;276:307-26. doi: 10.1016/S0076-6879(97)76066-X.
2
Strategies to overcome host immunity to adenovirus vectors in vaccine development.疫苗研发中克服宿主对腺病毒载体免疫的策略。
Expert Rev Vaccines. 2009 Jun;8(6):761-77. doi: 10.1586/erv.09.29.
3
Adenovirus receptors: implications for tropism, treatment and targeting.腺病毒受体：对嗜性、治疗和靶向作用的影响
Rev Med Virol. 2009 May;19(3):165-78. doi: 10.1002/rmv.612.
4
Efficient vascular endothelial gene transfer following intravenous adenovirus delivery.
Mol Ther. 2008 Dec;16(12):1904-5. doi: 10.1038/mt.2008.226.
5
Insights into adenovirus host cell interactions from structural studies.基于结构研究对腺病毒宿主细胞相互作用的见解。
Virology. 2009 Feb 20;384(2):380-8. doi: 10.1016/j.virol.2008.10.016. Epub 2008 Nov 20.
6
Cancer gene therapy with targeted adenoviruses.使用靶向腺病毒进行癌症基因治疗。
Expert Opin Drug Deliv. 2008 Nov;5(11):1231-40. doi: 10.1517/17425240802507636.
7
Characterization of infectivity of knob-modified adenoviral vectors in glioma.胶质瘤中旋钮修饰腺病毒载体的感染性特征
Cancer Biol Ther. 2008 May;7(5):786-93. doi: 10.4161/cbt.7.5.5421.
8
Structure of the C-terminal head domain of the fowl adenovirus type 1 short fibre.禽腺病毒1型短纤维C末端头部结构域的结构
Virology. 2008 Aug 15;378(1):169-76. doi: 10.1016/j.virol.2008.05.011. Epub 2008 Jun 17.
9
Structure of the C-terminal head domain of the fowl adenovirus type 1 long fiber.禽腺病毒1型长纤维C末端头部结构域的结构
J Gen Virol. 2007 Sep;88(Pt 9):2407-2416. doi: 10.1099/vir.0.82845-0.
10
Structural and mutational analysis of human Ad37 and canine adenovirus 2 fiber heads in complex with the D1 domain of coxsackie and adenovirus receptor.人腺病毒37型和犬腺病毒2型纤维头部与柯萨奇病毒和腺病毒受体D1结构域复合物的结构及突变分析
J Biol Chem. 2006 Nov 3;281(44):33704-16. doi: 10.1074/jbc.M605316200. Epub 2006 Aug 21.
Zotero 插件