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预测小鼠 Mpv17l 蛋白的新型异构体。

Prediction of novel isoforms of the mouse Mpv17l protein.

机构信息

Neuroscience Centre, Institute of Cell and Molecular Science, Barts and The London School of Medicine and Dentistry, Queen Mary, University of London, 4 Newark Street, Whitechapel, London E1 2AT, United Kingdom.

出版信息

Genome. 2009 Nov;52(11):968-74. doi: 10.1139/g09-061.

DOI:10.1139/g09-061
PMID:19935920
Abstract

The Mpv17l protein has two isoforms, M-LPL and M-LPS, which both regulate the production of reactive oxygen species (ROS) and protect against mitochondrial oxidative stress and apoptosis. M-LPL is ubiquitously expressed, while M-LPS is expressed mostly in the kidney of aged animals. We identified a variety of transcripts of the Mpv17l gene that could encode novel isoforms by mapping expressed sequence tags on the mouse M-LP genomic locus. We analysed the expression and evolutionary conservation of a novel Mpv17l transcript (mpv17l-002) that is predicted to encode a new protein, termed M-LP2. The isoform M-LP2 has the full length of M-LPS plus six amino acids at the end of its amino terminus, which could be encoded by an alternative 5'-flanking sequence. We show that the mRNA of M-LP2 has a different pattern of expression than the mRNA of M-LPS, and sequences of both transcripts are conserved in the rodent genome; however, neither of these isoforms is detected in the human genome. These observations suggest that the functions of certain M-LP isoforms are tissue- and species-specific, implying that their potential involvement in ROS metabolism may be redundant or may be complemented by other members of the Mpv17 family.

摘要

Mpv17l 蛋白有两种异构体,M-LPL 和 M-LPS,它们都能调节活性氧(ROS)的产生,保护线粒体免受氧化应激和凋亡。M-LPL 广泛表达,而 M-LPS 主要在老年动物的肾脏中表达。我们通过在小鼠 M-LP 基因组基因座上定位表达序列标签,鉴定了 Mpv17l 基因的多种转录本,这些转录本可能编码新的异构体。我们分析了一种新的 Mpv17l 转录本(mpv17l-002)的表达和进化保守性,该转录本预测编码一种新的蛋白质,称为 M-LP2。异构体 M-LP2 具有 M-LPS 的全长和其氨基末端的六个氨基酸,这可能由一个替代的 5'侧翼序列编码。我们表明,M-LP2 的 mRNA 的表达模式与 M-LPS 的 mRNA 不同,并且这两个转录本的序列在啮齿动物基因组中保守;然而,在人类基因组中都没有检测到这些异构体。这些观察结果表明,某些 M-LP 异构体的功能具有组织和物种特异性,这意味着它们在 ROS 代谢中的潜在作用可能是冗余的,或者可能被 Mpv17 家族的其他成员所补充。

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