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DMD 基因突变在肌营养不良症患者中的突变谱:现代诊断技术在大样本中的应用。

Mutational spectrum of DMD mutations in dystrophinopathy patients: application of modern diagnostic techniques to a large cohort.

机构信息

Departments of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah 84112, USA.

出版信息

Hum Mutat. 2009 Dec;30(12):1657-66. doi: 10.1002/humu.21114.

DOI:10.1002/humu.21114
PMID:19937601
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3404892/
Abstract

Mutations in the DMD gene, encoding the dystrophin protein, are responsible for the dystrophinopathies Duchenne Muscular Dystrophy (DMD), Becker Muscular Dystrophy (BMD), and X-linked Dilated Cardiomyopathy (XLDC). Mutation analysis has traditionally been challenging, due to the large gene size (79 exons over 2.2 Mb of genomic DNA). We report a very large aggregate data set comprised of DMD mutations detected in samples from patients enrolled in the United Dystrophinopathy Project, a multicenter research consortium, and in referral samples submitted for mutation analysis with a diagnosis of dystrophinopathy. We report 1,111 mutations in the DMD gene, including 891 mutations with associated phenotypes. These results encompass 506 point mutations (including 294 nonsense mutations) and significantly expand the number of mutations associated with the dystrophinopathies, highlighting the utility of modern diagnostic techniques. Our data supports the uniform hypermutability of CGA>TGA mutations, establishes the frequency of polymorphic muscle (Dp427m) protein isoforms and reveals unique genomic haplotypes associated with "private" mutations. We note that 60% of these patients would be predicted to benefit from skipping of a single DMD exon using antisense oligonucleotide therapy, and 62% would be predicted to benefit from an inclusive multiexonskipping approach directed toward exons 45 through 55.

摘要

DMD 基因的突变,导致肌营养不良蛋白的编码,负责肌营养不良症 Duchenne 型(DMD)、Becker 型肌营养不良症(BMD)和 X 连锁扩张型心肌病(XLDC)。由于基因较大(79 个外显子跨越 2.2Mb 的基因组 DNA),突变分析传统上具有挑战性。我们报告了一个非常大的综合数据集,其中包含了在参加美国肌营养不良症项目的患者样本中检测到的 DMD 突变,该项目是一个多中心研究联盟,以及在提交用于肌营养不良症突变分析的转诊样本中检测到的突变。我们报告了 DMD 基因中的 1,111 种突变,包括与表型相关的 891 种突变。这些结果包括 506 种点突变(包括 294 种无义突变),并显著增加了与肌营养不良症相关的突变数量,突出了现代诊断技术的实用性。我们的数据支持 CGA>TGA 突变的均匀高突变率,确定了多态性肌肉(Dp427m)蛋白异构体的频率,并揭示了与“私人”突变相关的独特基因组单倍型。我们注意到,60%的这些患者预计将受益于使用反义寡核苷酸治疗跳过单个 DMD 外显子,而 62%的患者预计将受益于针对外显子 45 至 55 的包容性多外显子跳跃方法。

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本文引用的文献

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Genotype-phenotype analysis in 2,405 patients with a dystrophinopathy using the UMD-DMD database: a model of nationwide knowledgebase.利用UMD-DMD数据库对2405例肌营养不良症患者进行基因型-表型分析:一个全国性知识库模型
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DMD pseudoexon mutations: splicing efficiency, phenotype, and potential therapy.杜氏肌营养不良症假外显子突变:剪接效率、表型及潜在治疗方法
Ann Neurol. 2008 Jan;63(1):81-9. doi: 10.1002/ana.21290.
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Multiexon skipping leading to an artificial DMD protein lacking amino acids from exons 45 through 55 could rescue up to 63% of patients with Duchenne muscular dystrophy.多外显子跳跃导致产生一种缺失外显子45至55氨基酸的人工杜兴肌营养不良蛋白,这可以挽救高达63%的杜兴肌营养不良患者。
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Duplications in the DMD gene.杜兴肌营养不良症基因中的重复序列。
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Entries in the Leiden Duchenne muscular dystrophy mutation database: an overview of mutation types and paradoxical cases that confirm the reading-frame rule.莱顿杜兴氏肌营养不良症突变数据库中的条目:突变类型及证实读码框规则的矛盾病例概述
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An exon skipping-associated nonsense mutation in the dystrophin gene uncovers a complex interplay between multiple antagonistic splicing elements.肌营养不良蛋白基因中一个与外显子跳跃相关的无义突变揭示了多个拮抗剪接元件之间的复杂相互作用。
Hum Mol Genet. 2006 Mar 15;15(6):999-1013. doi: 10.1093/hmg/ddl015. Epub 2006 Feb 6.
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