Department of Biology, Dalhousie University, Halifax, NS B3H 4J1, Canada.
Genome. 2009 Dec;52(12):985-92. doi: 10.1139/G09-071.
We describe a fatty acid-binding protein 1 (fabp1b.2) gene and its tissue-specific expression in zebrafish embryos and adults. The 3.5 kb zebrafish fabp1b.2 gene is the paralog of the previously described zebrafish fabp1a and fabp1b genes. Using the LN54 radiation hybrid mapping panel, we assigned the zebrafish fabp1b.2 gene to linkage group 8, the same linkage group to which fabp1b.1 was mapped. fabp1b.1 and fabp1b.2 appear to have arisen by a tandem duplication event. Whole-mount in situ hybridization of a riboprobe to embryos and larvae detected fabp1b.2 transcripts in the diencephalon and as spots in the periphery of the yolk sac. In adult zebrafish, in situ hybridization revealed fabp1b.2 transcripts in the anterior intestine and skin, and reverse transcription PCR (RT-PCR) detected fabp1b.2 transcripts in the intestine, brain, heart, ovary, skin, and eye. By contrast, fabp1b.1 transcripts were detected by RT-PCR in the liver, intestine, heart, testis, ovary, and gills. The tissue-specific distribution of transcripts for the tandemly duplicated fabp1b.1 and fabp1b.2 genes in adult tissues and during development suggests that the duplicated fabp1b genes of zebrafish have acquired additional functions compared with the ancestral fabp1 gene, i.e., by neofunctionalization. Furthermore, these functions were subsequently divided between fabp1b.1 and fabp1b.2 owing to subfunctionalization.
我们描述了脂肪酸结合蛋白 1(fabp1b.2)基因及其在斑马鱼胚胎和成鱼中的组织特异性表达。3.5kb 的斑马鱼 fabp1b.2 基因是先前描述的斑马鱼 fabp1a 和 fabp1b 基因的旁系同源物。使用 LN54 辐射杂种映射面板,我们将斑马鱼 fabp1b.2 基因分配到连锁群 8,该连锁群与 fabp1b.1 映射到的连锁群相同。fabp1b.1 和 fabp1b.2 似乎是通过串联重复事件产生的。对胚胎和幼虫进行核糖探针的全胚胎原位杂交检测到 fabp1b.2 转录物在间脑和卵黄囊周围的斑点中。在成年斑马鱼中,原位杂交揭示了 fabp1b.2 转录物在前肠和皮肤中,逆转录 PCR(RT-PCR)检测到 fabp1b.2 转录物在肠、脑、心脏、卵巢、皮肤和眼睛中。相比之下,通过 RT-PCR 在肝脏、肠、心脏、睾丸、卵巢和鳃中检测到 fabp1b.1 转录物。串联重复的 fabp1b.1 和 fabp1b.2 基因在成年组织和发育过程中的组织特异性分布表明,与祖先 fabp1 基因相比,斑马鱼的重复 fabp1b 基因获得了额外的功能,即通过新功能化。此外,由于亚功能化,这些功能随后在 fabp1b.1 和 fabp1b.2 之间进行了划分。