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鉴定 P2RX4 基因的启动子区域。

Identification of the promoter region of the P2RX4 gene.

机构信息

Department of Medicine, Nepean Clinical School, Nepean Hospital, Level 5, South Block, Penrith, NSW, 2750, Australia.

出版信息

Mol Biol Rep. 2010 Oct;37(7):3369-76. doi: 10.1007/s11033-009-9924-5. Epub 2009 Dec 2.

DOI:10.1007/s11033-009-9924-5
PMID:19953327
Abstract

The human P2X(4) purinergic receptor is an ATP gated cation-selective channel, which can be upregulated following nerve injury or stimulation by various cytokines. However, the transcriptional control of this regulation is unknown. In this study, the transcription initiation site was estimated to be 72 bp upstream of ATG start codon by using a novel sequencing based primer extension method with 5'-FAM tagged primers. To delineate the promoter region of the P2RX4 gene which encodes the P2X(4) receptor, we constructed 8 fragments (size range 100-4500 bp) covering the 4.5 Kb upstream region of the P2RX4 gene. A dual-colour luciferase reporter vector system was used to measure the promoter activities in both transfected HEK-293 cells and COS-7 cells for each fragment extracted from 5 to 7 randomly picked colonies. The 62 bp sequence upstream of the initiation site showed promoter activity. A putative GATA-2 binding site (-29 to -20) within this region was required for high promoter activity and GATA-2 was found to be one of the transcriptional factors binding to P2RX4 promoter by both fluorescent super electrophoresis mobility shift assay and immunoprecipitation using streptavidin coated Dynabeads and biotin-labeled double-strand DNA probes. A single nucleotide polymorphism with minor allele frequency of 0.23 was found within the GATA-2 binding site of P2RX4 promoter region which significantly reduced gene transcription. In conclusion, our data has identified the first transcription factor involved in P2X receptor expression.

摘要

人类 P2X(4) 嘌呤能受体是一种 ATP 门控阳离子选择性通道,可在神经损伤或各种细胞因子刺激后上调。然而,这种调节的转录控制尚不清楚。在这项研究中,使用一种新颖的基于测序的引物延伸方法,使用 5'-FAM 标记的引物,估计 ATG 起始密码子上游的转录起始位点为 72bp。为了描绘编码 P2X(4) 受体的 P2RX4 基因的启动子区域,我们构建了 8 个片段(大小范围为 100-4500bp),涵盖了 P2RX4 基因的 4.5Kb 上游区域。使用双荧光素酶报告基因载体系统,测量从 5 到 7 个随机挑选的菌落中提取的每个片段在转染的 HEK-293 细胞和 COS-7 细胞中的启动子活性。启动子活性位于起始位点上游的 62bp 序列。该区域内的一个假定 GATA-2 结合位点(-29 到-20)对于高启动子活性是必需的,通过荧光超速电泳迁移率变动分析和使用链霉亲和素包被的 Dynabeads 和生物素标记的双链 DNA 探针进行免疫沉淀,发现 GATA-2 是与 P2RX4 启动子结合的转录因子之一。在 P2RX4 启动子区域的 GATA-2 结合位点内发现了一个单核苷酸多态性,其等位基因频率为 0.23,这显著降低了基因转录。总之,我们的数据确定了第一个参与 P2X 受体表达的转录因子。

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