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在珊瑚礁鱼(Hypoplectrus puella)中,通过遗传距离估计扩散。

Estimating dispersal from genetic isolation by distance in a coral reef fish (Hypoplectrus puella).

机构信息

Smithsonian Tropical Research Institute, Box 0843-03092, Balboa, Ancon, Republic of Panama.

出版信息

Ecology. 2009 Nov;90(11):3087-98. doi: 10.1890/08-0859.1.

DOI:10.1890/08-0859.1
PMID:19967864
Abstract

The spatial scale of dispersal in coral reef fishes eludes ecologists despite the importance of this parameter for understanding the dynamics of ecological and evolutionary processes. Genetic isolation by distance (IBD) has been used to estimate dispersal in coral reef fishes, but its application in marine systems has been limited by insufficient sampling at different spatial scales and a lack of information regarding population density. Here, we present an analysis of IBD in the barred hamlet (Hypoplectrus puella, Serranidae) at spatial scales ranging from 10 to 3200 km complemented with SCUBA surveys of population densities covering 94000 m2 of reef. We used 10 hypervariable DNA markers to genotype 854 fish from 15 locations, and our results establish that IBD in H. puella emerges at a spatial scale of 175 km and is preserved up to the regional scale (3200 km). Assuming a normal or a Laplace dispersal function, our data are consistent with mean dispersal distances in H. puella that range between 2 and 14 km. Such small mean dispersal distances is a surprising result given the three-week pelagic larval duration of H. puella and the low level of genetic structure at the Caribbean scale (Wright's fixation index, F(ST), estimate = 0.005). Our data reinforce the importance of considering population density when estimating dispersal from IBD and underscore the relevance of sampling at local scales, even when genetic structure is weak at the regional scale.

摘要

尽管扩散的空间尺度对于理解生态和进化过程的动态至关重要,但珊瑚礁鱼类的扩散空间尺度仍让生态学家感到困惑。遗传距离隔离(IBD)已被用于估计珊瑚礁鱼类的扩散,但由于在不同空间尺度上的采样不足以及缺乏关于种群密度的信息,其在海洋系统中的应用受到限制。在这里,我们分析了空间尺度范围从 10 到 3200 公里的带状雀鲷(Hypoplectrus puella,雀鲷科)的 IBD,并结合对覆盖 94000 平方米珊瑚礁的种群密度的 SCUBA 调查,对其进行了补充。我们使用 10 个高变 DNA 标记对 15 个地点的 854 条鱼进行了基因分型,我们的结果表明,H. puella 的 IBD 出现在 175 公里的空间尺度上,并一直保持到区域尺度(3200 公里)。假设正态或拉普拉斯扩散函数,我们的数据与 H. puella 中的平均扩散距离在 2 到 14 公里之间一致。鉴于 H. puella 的三周浮游幼体期和加勒比地区遗传结构水平低(Wright 的固定指数,F(ST)估计值= 0.005),如此小的平均扩散距离是一个令人惊讶的结果。我们的数据强调了在从 IBD 估计扩散时考虑种群密度的重要性,并强调了即使在区域尺度上遗传结构较弱时,在本地尺度上采样的相关性。

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