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上位性选择对选择的基因组痕迹的影响。

The impact of epistatic selection on the genomic traces of selection.

机构信息

Department of Zoology & Biodiversity Research Centre, University of British Columbia, Vancouver, Canada.

出版信息

Mol Ecol. 2009 Dec;18(24):4985-7. doi: 10.1111/j.1365-294X.2009.04425.x.

Abstract

The rapid accumulation of genomic data has led to an explosion of studies searching for signals of past selection left within DNA sequences. Yet the majority of theoretical studies investigating the traces of selection have assumed a simple form of selection, without interactions among selectively fixed sites. Fitness interactions-'epistasis'-are commonplace, however, and take on a myriad of forms (Whitlock et al. 1995; Segrèet al. 2005; Phillips 2008). It is thus important to determine how such epistasis would influence selective sweeps. On p. 5018 of this issue, Takahasi (2009) explores the effect of epistasis on genetic variation neighbouring two sites that interact in determining fitness, finding that such epistasis has a dramatic impact on the genetic variability in regions surrounding the interacting sites.

摘要

基因组数据的快速积累导致了大量研究的出现,这些研究旨在从 DNA 序列中寻找过去选择留下的信号。然而,大多数研究选择痕迹的理论研究都假设了一种简单的选择形式,没有选择性固定位点之间的相互作用。然而,适应度相互作用——“上位性”——是很常见的,并且有多种形式(Whitlock 等人,1995 年;Segrè 等人,2005 年;Phillips 等人,2008 年)。因此,确定这种上位性如何影响选择清除是很重要的。在本期第 5018 页,Takahasi(2009)探讨了上位性对两个相互作用决定适应度的位点附近遗传变异的影响,发现这种上位性对相互作用位点周围区域的遗传可变性有显著影响。

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