Division Systems Biology of Signal Transduction, DKFZ-ZMBH Alliance, German Cancer Research Center, Heidelberg, Germany.
Mol Syst Biol. 2009;5:334. doi: 10.1038/msb.2009.91. Epub 2009 Dec 22.
Cell fate decisions are regulated by the coordinated activation of signalling pathways such as the extracellular signal-regulated kinase (ERK) cascade, but contributions of individual kinase isoforms are mostly unknown. By combining quantitative data from erythropoietin-induced pathway activation in primary erythroid progenitor (colony-forming unit erythroid stage, CFU-E) cells with mathematical modelling, we predicted and experimentally confirmed a distributive ERK phosphorylation mechanism in CFU-E cells. Model analysis showed bow-tie-shaped signal processing and inherently transient signalling for cytokine-induced ERK signalling. Sensitivity analysis predicted that, through a feedback-mediated process, increasing one ERK isoform reduces activation of the other isoform, which was verified by protein over-expression. We calculated ERK activation for biochemically not addressable but physiologically relevant ligand concentrations showing that double-phosphorylated ERK1 attenuates proliferation beyond a certain activation level, whereas activated ERK2 enhances proliferation with saturation kinetics. Thus, we provide a quantitative link between earlier unobservable signalling dynamics and cell fate decisions.
细胞命运的决定受信号通路的协调激活调控,如细胞外信号调节激酶 (ERK) 级联,但单个激酶同工型的贡献大多未知。通过将红细胞生成素诱导的信号通路在原代红细胞祖细胞(集落形成单位红细胞阶段,CFU-E)中的激活的定量数据与数学建模相结合,我们预测并通过实验证实了 CFU-E 细胞中的 ERK 磷酸化的分布式机制。模型分析表明,细胞因子诱导的 ERK 信号具有蝴蝶结形状的信号处理和固有瞬态信号。敏感性分析预测,通过反馈介导的过程,增加一种 ERK 同工型会降低另一种同工型的激活,这通过蛋白质过表达得到了验证。我们计算了生物化学上不可寻址但生理上相关的配体浓度的 ERK 激活,结果表明双磷酸化的 ERK1 在一定的激活水平之外会抑制增殖,而激活的 ERK2 则以饱和动力学增强增殖。因此,我们提供了一个定量的联系,将早期不可观察的信号动力学与细胞命运决定联系起来。