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蜱趋化因子结合蛋白对趋化因子的隔离作用的结构基础:Evasin-1 与 CCL3 复合物的晶体结构。

Structural basis of chemokine sequestration by a tick chemokine binding protein: the crystal structure of the complex between Evasin-1 and CCL3.

机构信息

Merck Serono Geneva Research Center, Merck Serono S.A., Geneva, Switzerland.

出版信息

PLoS One. 2009 Dec 30;4(12):e8514. doi: 10.1371/journal.pone.0008514.

Abstract

BACKGROUND

Chemokines are a subset of cytokines responsible for controlling the cellular migration of inflammatory cells through interaction with seven transmembrane G protein-coupled receptors. The blocking of a chemokine-receptor interaction results in a reduced inflammatory response, and represents a possible anti-inflammatory strategy, a strategy that is already employed by some virus and parasites. Anti-chemokine activity has been described in the extracts of tick salivary glands, and we have recently described the cloning and characterization of such chemokine binding proteins from the salivary glands, which we have named Evasins.

METHODOLOGY/PRINCIPAL FINDINGS: We have solved the structure of Evasin-1, a very small and highly selective chemokine-binding protein, by x-ray crystallography and report that the structure is novel, with no obvious similarity to the previously described structures of viral chemokine binding proteins. Moreover it does not possess a known fold. We have also solved the structure of the complex of Evasin-1 and its high affinity ligand, CCL3. The complex is a 1:1 heterodimer in which the N-terminal region of CCL3 forms numerous contacts with Evasin-1, including prominent pi-pi interactions between residues Trp89 and Phe14 of the binding protein and Phe29 and Phe13 of the chemokine.

CONCLUSIONS/SIGNIFICANCE: However, these interactions do not appear to be crucial for the selectivity of the binding protein, since these residues are found in CCL5, which is not a ligand for Evasin-1. The selectivity of the interaction would appear to lie in the N-terminal residues of the chemokine, which form the "address" whereas the hydrophobic interactions in the rest of the complex would serve primarily to stabilize the complex. A thorough understanding of the binding mode of this small protein, and its other family members, could be very informative in the design of potent neutralizing molecules of pro-inflammatory mediators of the immune system, such as chemokines.

摘要

背景

趋化因子是细胞因子的一个子集,负责通过与 7 个跨膜 G 蛋白偶联受体相互作用来控制炎症细胞的细胞迁移。趋化因子-受体相互作用的阻断会导致炎症反应减弱,这代表了一种可能的抗炎策略,一些病毒和寄生虫已经采用了这种策略。在蜱唾液腺的提取物中已经描述了抗趋化因子活性,我们最近还描述了从唾液腺中克隆和表征的这种趋化因子结合蛋白,我们将其命名为 Evasins。

方法/主要发现:我们通过 X 射线晶体学解决了 Evasin-1 的结构,Evasin-1 是一种非常小且高度选择性的趋化因子结合蛋白,并报告说该结构是新颖的,与以前描述的病毒趋化因子结合蛋白的结构没有明显的相似性。此外,它不具有已知的折叠。我们还解决了 Evasin-1 与其高亲和力配体 CCL3 的复合物的结构。该复合物是 1:1 异二聚体,其中 CCL3 的 N 端区域与 Evasin-1 形成许多接触,包括结合蛋白的色氨酸 89 和苯丙氨酸 14 与趋化因子的苯丙氨酸 29 和苯丙氨酸 13 之间的突出的 pi-pi 相互作用。

结论/意义:然而,这些相互作用似乎对于结合蛋白的选择性不是至关重要的,因为这些残基存在于 CCL5 中,而 CCL5 不是 Evasin-1 的配体。相互作用的选择性似乎在于趋化因子的 N 端残基,它们形成“地址”,而复合物的其余部分中的疏水性相互作用主要用于稳定复合物。对这种小蛋白及其其他家族成员的结合模式的深入了解,可以为设计针对免疫系统的促炎介质(如趋化因子)的有效中和分子提供非常有价值的信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2916/2796168/6564256f74d8/pone.0008514.g001.jpg

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