• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种快速、可重现且低成本的方法,用于通过“目标” MALDI-TOF/TOF 质谱对“珠上”肽进行序列反卷积。

A fast, reproducible and low-cost method for sequence deconvolution of 'on-bead' peptides via 'on-target' maldi-TOF/TOF mass spectrometry.

机构信息

Department of Chemistry, University of Western Ontario, London, ON, Canada.

出版信息

J Mass Spectrom. 2010 Mar;45(3):241-51. doi: 10.1002/jms.1708.

DOI:10.1002/jms.1708
PMID:20041400
Abstract

A novel approach to high-throughput sequence deconvolution of on-bead small peptides (MW < 2000 Da) using on-target MALDI-TOF/TOF instrumentation is presented. Short peptides of pentamer and octamer length, covalently attached to TentaGel polystyrene beads through a photolabile linker, were placed onto the MALDI target, apportioned with suitable matrix (2,5-dihydroxybenzoic acid) and then hit with the instrument laser (Nd : YAG, 355 nm). This induced easy and highly reproducible photochemical cleavage, desorption (MS mode) and fragmentation (MS/MS mode). Peptide fragments were identified with a mass accuracy of 0.1 Da of the expected values. This technique significantly accelerates the sequence determination of positive peptide hits obtained from random combinatorial libraries when screening against biological targets, paving the way for a rapid and efficient method to identify molecular imaging ligands specific to pathological targets in cancer and other diseases.

摘要

本文提出了一种新的高通量方法,用于通过在靶 MALDI-TOF/TOF 仪器对在珠小肽(MW < 2000 Da)进行高通量序列反卷积。通过光不稳定连接子共价连接到 TentaGel 聚苯乙烯珠上的五聚体和八聚体长度的短肽被放置在 MALDI 靶上,用合适的基质(2,5-二羟基苯甲酸)分配,然后用仪器激光(Nd:YAG,355nm)照射。这诱导了简单且高度可重复的光化学裂解、解吸(MS 模式)和片段化(MS/MS 模式)。肽片段的鉴定具有预期值 0.1Da 的质量精度。当针对生物靶标筛选时,该技术可显著加速从随机组合文库中获得的阳性肽命中的序列确定,为识别癌症和其他疾病中病理靶标特异性分子成像配体的快速有效的方法铺平了道路。

相似文献

1
A fast, reproducible and low-cost method for sequence deconvolution of 'on-bead' peptides via 'on-target' maldi-TOF/TOF mass spectrometry.一种快速、可重现且低成本的方法,用于通过“目标” MALDI-TOF/TOF 质谱对“珠上”肽进行序列反卷积。
J Mass Spectrom. 2010 Mar;45(3):241-51. doi: 10.1002/jms.1708.
2
Identification of protein-binding peptides by direct matrix-assisted laser desorption ionization time-of-flight mass spectrometry analysis of peptide beads selected from the screening of one bead-one peptide combinatorial libraries.通过对从一珠一肽组合文库筛选出的肽珠进行直接基质辅助激光解吸电离飞行时间质谱分析来鉴定蛋白质结合肽。
Anal Biochem. 2007 Nov 15;370(2):215-22. doi: 10.1016/j.ab.2007.07.032. Epub 2007 Aug 9.
3
High-throughput one-bead-one-compound approach to peptide-encoded combinatorial libraries: MALDI-MS analysis of single TentaGel beads.用于肽编码组合文库的高通量单珠单化合物方法:单个TentaGel珠的基质辅助激光解吸电离质谱分析
J Comb Chem. 2003 Mar-Apr;5(2):125-37. doi: 10.1021/cc020083a.
4
Sample preparation for sequencing hits from one-bead-one-peptide combinatorial libraries by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.通过基质辅助激光解吸/电离飞行时间质谱法对单珠一单肽组合文库的测序命中进行样品制备。
Anal Biochem. 2010 May 15;400(2):295-7. doi: 10.1016/j.ab.2010.01.029. Epub 2010 Feb 1.
5
CHASE, a charge-assisted sequencing algorithm for automated homology-based protein identifications with matrix-assisted laser desorption/ionization time-of-flight post-source decay fragmentation data.CHASE,一种电荷辅助测序算法,用于基于同源性的蛋白质自动鉴定,采用基质辅助激光解吸/电离飞行时间源后衰变碎裂数据。
J Mass Spectrom. 2005 Apr;40(4):475-88. doi: 10.1002/jms.817.
6
Increased sensitivity of tryptic peptide detection by MALDI-TOF mass spectrometry is achieved by conversion of lysine to homoarginine.通过将赖氨酸转化为高精氨酸,可提高基质辅助激光解吸电离飞行时间质谱法对胰蛋白酶肽段检测的灵敏度。
Anal Biochem. 2000 Dec 1;287(1):110-7. doi: 10.1006/abio.2000.4834.
7
Comparison of laser-induced dissociation and high-energy collision-induced dissociation using matrix-assisted laser desorption/ionization tandem time-of-flight (MALDI-TOF/TOF) for peptide and protein identification.使用基质辅助激光解吸/电离串联飞行时间质谱(MALDI-TOF/TOF)进行肽和蛋白质鉴定时,激光诱导解离与高能碰撞诱导解离的比较。
Rapid Commun Mass Spectrom. 2004;18(18):2093-105. doi: 10.1002/rcm.1589.
8
Peptide sequencing by MALDI 193-nm photodissociation TOF MS.通过基质辅助激光解吸电离193纳米光解离飞行时间质谱进行肽测序
Methods Enzymol. 2005;402:186-209. doi: 10.1016/S0076-6879(05)02006-9.
9
Improved protein identification efficiency by mass spectrometry using N-terminal chemical derivatization of peptides from Angiostrongylus costaricensis, a nematode with unknown genome.利用对来自哥斯达黎加管圆线虫(一种基因组未知的线虫)的肽段进行N端化学衍生化,通过质谱法提高蛋白质鉴定效率。
J Mass Spectrom. 2007 Oct;42(10):1363-74. doi: 10.1002/jms.1324.
10
High-throughput sequence determination of cyclic peptide library members by partial Edman degradation/mass spectrometry.通过部分埃德曼降解/质谱法对环肽库成员进行高通量序列测定。
J Am Chem Soc. 2006 Oct 4;128(39):13000-9. doi: 10.1021/ja063722k.

引用本文的文献

1
Viral nanoparticles decorated with novel EGFL7 ligands enable intravital imaging of tumor neovasculature.新型 EGFL7 配体修饰的病毒纳米颗粒可实现肿瘤新生血管的活体成像。
Nanoscale. 2017 Aug 24;9(33):12096-12109. doi: 10.1039/c7nr02558k.
2
High-Throughput Approaches to the Development of Molecular Imaging Agents.分子成像剂开发的高通量方法。
Mol Imaging Biol. 2017 Apr;19(2):163-182. doi: 10.1007/s11307-016-1016-z.
3
Design of a Microfluidic Chip for Magnetic-Activated Sorting of One-Bead-One-Compound Libraries.用于单珠单化合物文库磁激活分选的微流控芯片设计
ACS Comb Sci. 2016 Jun 13;18(6):271-8. doi: 10.1021/acscombsci.5b00180. Epub 2016 May 23.
4
High-throughput small molecule identification using MALDI-TOF and a nanolayered substrate.利用 MALDI-TOF 和纳米层状基质进行高通量小分子鉴定。
Anal Chem. 2011 Jul 1;83(13):5283-9. doi: 10.1021/ac2006735. Epub 2011 Jun 8.
5
Analysis of synovial fluid in knee joint of osteoarthritis:5 proteome patterns of joint inflammation based on matrix-assisted laser desorption/ionization time-of-flight mass spectrometry.骨关节炎膝关节滑液分析:基于基质辅助激光解吸电离飞行时间质谱的 5 种关节炎症蛋白质组模式。
Int Orthop. 2012 Jan;36(1):57-64. doi: 10.1007/s00264-011-1258-y. Epub 2011 Apr 21.