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嗜热栖热菌HB8中假定的4-氨基-4-脱氧分支酸裂解酶的结构

Structure of putative 4-amino-4-deoxychorismate lyase from Thermus thermophilus HB8.

作者信息

Padmanabhan Balasundaram, Bessho Yoshitaka, Ebihara Akio, Antonyuk Svetlana V, Ellis Mark J, Strange Richard W, Kuramitsu Seiki, Watanabe Nobuhisa, Hasnain S Samar, Yokoyama Shigeyuki

机构信息

Systems and Structural Biology Center, Yokohama Institute, RIKEN, 1-7-22 Suehiro, Tsurumi, Yokohama 230-0045, Japan.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2009 Dec 1;65(Pt 12):1234-9. doi: 10.1107/S1744309109050052. Epub 2009 Nov 27.

Abstract

The pyridoxal 5'-phosphate-dependent enzyme 4-amino-4-deoxychorismate lyase converts 4-amino-4-deoxychorismate to p-aminobenzoate and pyruvate in one of the crucial steps in the folate-biosynthesis pathway. The primary structure of the hypothetical protein TTHA0621 from Thermus thermophilus HB8 suggests that TTHA0621 is a putative 4-amino-4-deoxychorismate lyase. Here, the crystal structure of TTHA0621 is reported at 1.93 A resolution. The asymmetric unit contained four NCS molecules related by 222 noncrystallographic symmetry, in which the formation of intact dimers may be functionally important. The cofactor pyridoxal 5'-phosphate (PLP) binds to the protein in the large cleft formed by the N-terminal and C-terminal domains of TTHA0621. The high structural similarity and the conservation of the functional residues in the catalytic region compared with 4-amino-4-deoxychorismate lyase (PabC; EC 4.1.3.38) from Escherichia coli suggest that the TTHA0621 protein may also possess 4-amino-4-deoxychorismate lyase activity.

摘要

磷酸吡哆醛依赖性酶4-氨基-4-脱氧分支酸裂解酶在叶酸生物合成途径的关键步骤之一中,将4-氨基-4-脱氧分支酸转化为对氨基苯甲酸和丙酮酸。嗜热栖热菌HB8的假定蛋白TTHA0621的一级结构表明,TTHA0621是一种推定的4-氨基-4-脱氧分支酸裂解酶。在此,报道了TTHA0621的晶体结构,分辨率为1.93 Å。不对称单元包含通过222非晶体学对称性相关的四个NCS分子,其中完整二聚体的形成可能在功能上很重要。辅因子磷酸吡哆醛(PLP)在由TTHA0621的N端和C端结构域形成的大裂隙中与蛋白质结合。与来自大肠杆菌的4-氨基-4-脱氧分支酸裂解酶(PabC;EC 4.1.3.38)相比,催化区域的高结构相似性和功能残基的保守性表明,TTHA0621蛋白也可能具有4-氨基-4-脱氧分支酸裂解酶活性。

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