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DNA 双螺旋的不连续性不稳定性。

Discrete instability in the DNA double helix.

机构信息

Department of Physics, Laboratory of Mechanics, Faculty of Science, University of Yaounde I, PO Box 812, Yaounde, Cameroon.

出版信息

Chaos. 2009 Dec;19(4):043101. doi: 10.1063/1.3234244.

Abstract

Modulational instability (MI) is explored in the framework of the base-rotor model of DNA dynamics. We show, in fact, that the helicoidal coupling introduced in the spin model of DNA reduces the system to a modified discrete sine-Gordon (sG) equation. The MI criterion is thus modified and displays interesting features because of the helicoidal coupling. In the simulations, we have found that a train of pulses is generated when the lattice is subjected to MI, in agreement with analytical results obtained in a modified discrete sG equation. Also, the competitive effects of the harmonic longitudinal and helicoidal constants on the dynamics of the system are notably pointed out. In the same way, it is shown that MI can lead to energy localization which becomes high for some values of the helicoidal coupling constant.

摘要

在 DNA 动力学的基底-转子模型框架内探索调制不稳定性 (MI)。我们实际上表明,螺旋耦合引入 DNA 的自旋模型会将系统简化为一个修正的离散正弦-戈登 (sG) 方程。因此,由于螺旋耦合,MI 准则被修正并显示出有趣的特征。在模拟中,当晶格受到 MI 时,我们发现会产生脉冲序列,这与在修正的离散 sG 方程中获得的分析结果一致。此外,还特别指出了谐波纵向和螺旋常数对系统动力学的竞争影响。同样,表明 MI 可以导致能量局域化,对于某些螺旋耦合常数的值,能量局域化会变得很高。

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