The Gade Institute, Section for Microbiology and Immunology, University of Bergen, Norway.
Bioinformatics. 2010 Mar 1;26(5):698-9. doi: 10.1093/bioinformatics/btq004. Epub 2010 Jan 14.
The Microbial Proteomic Resource (MPR) is a repository service that contains non-redundant protein databases of related bacterial strains, which were generated through an in-house developed software called Multi-Strain Mass Spectrometry Prokaryotic DataBase Builder (MSMSpdbb). MSMSpdbb merges and clusters protein sequences inferred from genomic sequences, and provide a protein list in FASTA format that covers for divergence in gene annotation, translational start site choice and presence of single nucleotide polymorphisms and other mutations.
MSMSpdbb was developed in C++ using the Qt libraries (Nokia) and licensed under the GNU General Public License version 2. MSMSpdbb is freely available, and its installation files, instructions for use and additional documentation can be found at the MPR web site http://org.uib.no/prokaryotedb/ can also be found at Proteomecommons.org (see Supplementary Methods for Hash number).
微生物蛋白质组资源(MPR)是一个存储库服务,其中包含通过内部开发的软件 Multi-Strain Mass Spectrometry Prokaryotic DataBase Builder(MSMSpdbb)生成的相关细菌菌株的非冗余蛋白质数据库。MSMSpdbb 合并和聚类从基因组序列推断出的蛋白质序列,并提供 FASTA 格式的蛋白质列表,涵盖基因注释、翻译起始位点选择以及单核苷酸多态性和其他突变的差异。
MSMSpdbb 是使用 C++和 Qt 库(Nokia)开发的,并根据 GNU 通用公共许可证第 2 版获得许可。MSMSpdbb 是免费提供的,其安装文件、使用说明和其他文档可在 MPR 网站 http://org.uib.no/prokaryotedb/ 上找到,也可在 Proteomecommons.org 上找到(请参阅补充方法中的哈希数)。