Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks St, Toronto, ON, Canada M5S 3B2.
Mol Ecol. 2010 Feb;19(4):798-809. doi: 10.1111/j.1365-294X.2009.04491.x. Epub 2010 Jan 18.
New genomic resources and genetic tools of the past few years have advanced the nematode genus Caenorhabditis as a model for comparative biology. However, understanding of natural genetic variation at molecular and phenotypic levels remains rudimentary for most species in this genus, and for C. briggsae in particular. Here we characterize phenotypic variation in C. briggsae's sensitivity to the potentially important and variable environmental toxin, ethanol, for globally diverse strains. We also quantify nucleotide variation in a new sample of 32 strains from four continents, including small islands, and for the closest-known relative of this species (C. sp. 9). We demonstrate that C. briggsae exhibits little heritable variation for the effects of ethanol on the norm of reaction for survival and reproduction. Moreover, C. briggsae does not differ significantly from C. elegans in our assays of its response to this substance that both species likely encounter regularly in habitats of rotting fruit and vegetation. However, we uncover drastically more molecular genetic variation than was known previously for this species, despite most strains, including all island strains, conforming to the broad biogeographic patterns described previously. Using patterns of sequence divergence between populations and between species, we estimate that the self-fertilizing mode of reproduction by hermaphrodites in C. briggsae likely evolved sometime between 0.9 and 10 million generations ago. These insights into C. briggsae's natural history and natural genetic variation greatly expand the potential of this organism as an emerging model for studies in molecular and quantitative genetics, the evolution of development, and ecological genetics.
过去几年中,新的基因组资源和遗传工具使线虫属 Caenorhabditis 成为比较生物学的模型。然而,对于该属中的大多数物种,包括 C. briggsae,其分子和表型水平的自然遗传变异的理解仍然很基础。在这里,我们描述了 C. briggsae 对潜在重要且多变的环境毒素乙醇的敏感性的表型变异,这些菌株来自全球不同地区。我们还量化了来自四大洲包括小岛屿的 32 个新菌株的核苷酸变异,以及该物种最接近的亲缘物种(C. sp. 9)。我们证明,C. briggsae 对乙醇对生存和繁殖的正常反应的影响几乎没有遗传变异。此外,在我们对这种物质的反应的测定中,C. briggsae 与 C. elegans 没有显著差异,这两种物种可能经常在腐烂水果和植被的栖息地中遇到这种物质。然而,尽管包括所有岛屿菌株在内的大多数菌株都符合以前描述的广泛生物地理模式,但我们发现的分子遗传变异比以前已知的要多得多。利用种群之间和物种之间的序列分歧模式,我们估计 C. briggsae 中雌雄同体的自交繁殖方式可能是在 0.9 到 1000 万代之前的某个时候进化而来的。这些对 C. briggsae 的自然历史和自然遗传变异的深入了解极大地扩展了该生物作为新兴模型的潜力,可用于研究分子和数量遗传学、发育进化以及生态遗传学。