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一种用于检测视网膜母细胞瘤中RB1基因突变的全面、灵敏且经济的方法。

A comprehensive, sensitive and economical approach for the detection of mutations in the RB1 gene in retinoblastoma.

作者信息

Parsam Vidya Latha, Kannabiran Chitra, Honavar Santosh, Vemuganti Geeta K, Ali Mohammad Javed

机构信息

Kallam Anji Reddy Molecular Genetics Laboratory, Hyderabad Eye Research Foundation, L. V. Prasad Eye Institute, Hyderabad, India.

出版信息

J Genet. 2009 Dec;88(4):517-27. doi: 10.1007/s12041-009-0069-z.

Abstract

Retinoblastoma (Rb) is the most common primary intraocular malignancy in children. It is brought about by the mutational inactivation of both alleles of RB1 gene in the developing retina. To identify the RB1 mutations, we analysed 74 retinoblastoma patients by screening the exons and the promoter region of RB1. The strategy used was to detect large deletions/duplications by fluorescent quantitative multiplex PCR; small deletions/insertions by fluorescent genotyping of RB1 alleles, and point mutations by PCR-RFLP and sequencing. Genomic DNA from the peripheral blood leucocytes of 74 Rb patients (53 with bilateral Rb, 21 with unilateral Rb; 4 familial cases) was screened for mutations. Recurrent mutations were identified in five patients with bilateral Rb, large deletions in 11 patients (nine with bilateral Rb and two with unilateral Rb), small deletions/insertions were found in 12 patients all with bilateral Rb, and point mutations in 26 patients (14 nonsense, six splice site, five substitution and one silent change). Three mutations were associated with variable expressivity of the disease in different family members. Using this method, the detection rates achieved in patients with bilateral Rb were 44/53 (83%) and with unilateral Rb, 5/21 (23.8%). This approach may be feasible for clinical genetic testing and counselling of patients.

摘要

视网膜母细胞瘤(Rb)是儿童最常见的原发性眼内恶性肿瘤。它是由发育中的视网膜中RB1基因的两个等位基因发生突变失活所致。为了鉴定RB1突变,我们通过筛查RB1的外显子和启动子区域,对74例视网膜母细胞瘤患者进行了分析。所采用的策略是通过荧光定量多重PCR检测大片段缺失/重复;通过RB1等位基因的荧光基因分型检测小片段缺失/插入,以及通过PCR-RFLP和测序检测点突变。对74例视网膜母细胞瘤患者(53例双侧视网膜母细胞瘤、21例单侧视网膜母细胞瘤;4例家族性病例)外周血白细胞的基因组DNA进行了突变筛查。在5例双侧视网膜母细胞瘤患者中鉴定出复发性突变,11例患者存在大片段缺失(9例双侧视网膜母细胞瘤和2例单侧视网膜母细胞瘤),12例均为双侧视网膜母细胞瘤的患者发现了小片段缺失/插入,26例患者存在点突变(14例无义突变、6例剪接位点突变、5例替换突变和1例沉默突变)。3种突变与不同家族成员中疾病的可变表达相关。使用这种方法,双侧视网膜母细胞瘤患者的检测率为44/53(83%),单侧视网膜母细胞瘤患者的检测率为5/21(23.8%)。这种方法对于患者的临床基因检测和咨询可能是可行的。

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