Suppr超能文献

蛋白质折叠途径依赖性稳定性的结构基础:有向展开与整体展开。

Structural basis for unfolding pathway-dependent stability of proteins: vectorial unfolding versus global unfolding.

机构信息

Department of Chemistry, Graduate School of Science, Nagoya University, Chikusa-ku, Nagoya 464-8602, Japan.

出版信息

Protein Sci. 2010 Apr;19(4):693-702. doi: 10.1002/pro.346.

Abstract

Point mutations in proteins can have different effects on protein stability depending on the mechanism of unfolding. In the most interesting case of I27, the Ig-like module of the muscle protein titin, one point mutation (Y9P) yields opposite effects on protein stability during denaturant-induced "global unfolding" versus "vectorial unfolding" by mechanical pulling force or cellular unfolding systems. Here, we assessed the reason for the different effects of the Y9P mutation of I27 on the overall molecular stability and N-terminal unraveling by NMR. We found that the Y9P mutation causes a conformational change that is transmitted through beta-sheet structures to reach the central hydrophobic core in the interior and alters its accessibility to bulk solvent, which leads to destabilization of the hydrophobic core. On the other hand, the Y9P mutation causes a bend in the backbone structure, which leads to the formation of a more stable N-terminal structure probably through enhanced hydrophobic interactions.

摘要

蛋白质中的点突变会根据展开机制对蛋白质稳定性产生不同的影响。在最有趣的情况下,即肌球蛋白titin 的免疫球蛋白样模块中的 I27 ,一个点突变(Y9P)在变性剂诱导的“全局展开”与机械拉力或细胞展开系统引起的“矢量展开”过程中对蛋白质稳定性产生相反的影响。在这里,我们通过 NMR 评估了 I27 的 Y9P 突变对整体分子稳定性和 N 端解开的不同影响的原因。我们发现,Y9P 突变会引起构象变化,这种变化通过β-折叠结构传递,到达内部的中央疏水区,并改变其对体相溶剂的可及性,从而导致疏水区的不稳定。另一方面,Y9P 突变会导致骨架结构弯曲,从而形成更稳定的 N 端结构,这可能是通过增强疏水相互作用实现的。

相似文献

5
The effect of core destabilization on the mechanical resistance of I27.
Biophys J. 2002 Jul;83(1):458-72. doi: 10.1016/S0006-3495(02)75182-5.
6
Comparison of the protein-unfolding pathways between mitochondrial protein import and atomic-force microscopy measurements.
Proc Natl Acad Sci U S A. 2005 Dec 13;102(50):17999-8004. doi: 10.1073/pnas.0504495102. Epub 2005 Dec 2.
8
Temperature and chemical denaturant dependence of forced unfolding of titin I27.
J Phys Chem B. 2009 Aug 6;113(31):10845-8. doi: 10.1021/jp9002356.
9
Hidden complexity in the mechanical properties of titin.
Nature. 2003 Mar 27;422(6930):446-9. doi: 10.1038/nature01517.
10
Probing osmolyte participation in the unfolding transition state of a protein.
Proc Natl Acad Sci U S A. 2011 Jun 14;108(24):9759-64. doi: 10.1073/pnas.1101934108. Epub 2011 May 25.

引用本文的文献

2
Cell response to extracellular matrix viscous energy dissipation outweighs high-rigidity sensing.
Sci Adv. 2024 Nov 15;10(46):eadf9758. doi: 10.1126/sciadv.adf9758.
5
Bioinformatics classification of mutations in patients with Mucopolysaccharidosis IIIA.
Metab Brain Dis. 2019 Dec;34(6):1577-1594. doi: 10.1007/s11011-019-00465-6. Epub 2019 Aug 5.
6
Folding pathway of an Ig domain is conserved on and off the ribosome.
Proc Natl Acad Sci U S A. 2018 Nov 27;115(48):E11284-E11293. doi: 10.1073/pnas.1810523115. Epub 2018 Nov 9.
7
Computational approach to unravel the impact of missense mutations of proteins (D2HGDH and IDH2) causing D-2-hydroxyglutaric aciduria 2.
Metab Brain Dis. 2018 Oct;33(5):1699-1710. doi: 10.1007/s11011-018-0278-3. Epub 2018 Jul 9.
9
Tom70 enhances mitochondrial preprotein import efficiency by binding to internal targeting sequences.
J Cell Biol. 2018 Apr 2;217(4):1369-1382. doi: 10.1083/jcb.201708044. Epub 2018 Jan 30.
10
Mimicking Ribosomal Unfolding of RNA Pseudoknot in a Protein Channel.
J Am Chem Soc. 2015 Dec 23;137(50):15742-52. doi: 10.1021/jacs.5b07910. Epub 2015 Dec 10.

本文引用的文献

1
Importing mitochondrial proteins: machineries and mechanisms.
Cell. 2009 Aug 21;138(4):628-44. doi: 10.1016/j.cell.2009.08.005.
2
Multiple pathways for mitochondrial protein traffic.
Biol Chem. 2009 Aug;390(8):723-30. doi: 10.1515/BC.2009.087.
4
Translocation of proteins into mitochondria.
Annu Rev Biochem. 2007;76:723-49. doi: 10.1146/annurev.biochem.76.052705.163409.
5
Mechanical unfolding of proteins: insights into biology, structure and folding.
Curr Opin Struct Biol. 2007 Feb;17(1):58-66. doi: 10.1016/j.sbi.2007.01.006. Epub 2007 Jan 23.
7
Comparison of the protein-unfolding pathways between mitochondrial protein import and atomic-force microscopy measurements.
Proc Natl Acad Sci U S A. 2005 Dec 13;102(50):17999-8004. doi: 10.1073/pnas.0504495102. Epub 2005 Dec 2.
8
Protein unfolding in the cell.
Trends Biochem Sci. 2004 Nov;29(11):593-600. doi: 10.1016/j.tibs.2004.09.011.
9
Comparison of the transition states for folding of two Ig-like proteins from different superfamilies.
J Mol Biol. 2004 Oct 29;343(4):1111-23. doi: 10.1016/j.jmb.2004.08.100.
10
The CCP4 suite: programs for protein crystallography.
Acta Crystallogr D Biol Crystallogr. 1994 Sep 1;50(Pt 5):760-3. doi: 10.1107/S0907444994003112.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验