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TonB 富含脯氨酸的结构域具有足够长度的伸展型多聚脯氨酸 II 样构象,可跨越革兰氏阴性菌的周质。

The proline-rich domain of TonB possesses an extended polyproline II-like conformation of sufficient length to span the periplasm of Gram-negative bacteria.

机构信息

Department of Chemistry, University of Konstanz, Konstanz 78457, Germany.

出版信息

Protein Sci. 2010 Apr;19(4):625-30. doi: 10.1002/pro.345.

DOI:10.1002/pro.345
PMID:20095050
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2867004/
Abstract

TonB from Escherichia coli and its homologues are critical for the uptake of siderophores through the outer membrane of Gram-negative bacteria using chemiosmotic energy. When different models for the mechanism of TonB mediated energy transfer from the inner to the outer membrane are discussed, one of the key questions is whether TonB spans the periplasm. In this article, we use long range distance measurements by spin-label pulsed EPR (Double Electron-Electron Resonance, DEER) and CD spectroscopy to show that the proline-rich segment of TonB exists in a PPII-like conformation. The result implies that the proline-rich segment of TonB possesses a length of more than 15 nm, sufficient to span the periplasm of Gram-negative bacteria.

摘要

大肠杆菌中的 TonB 及其同源物对于利用化学渗透能量通过革兰氏阴性菌的外膜摄取铁载体至关重要。当讨论 TonB 介导的能量从内膜到外膜转移的不同机制模型时,关键问题之一是 TonB 是否跨越周质空间。在本文中,我们使用长程距离测量自旋标记脉冲电子顺磁共振(Double Electron-Electron Resonance,DEER)和 CD 光谱来表明 TonB 的脯氨酸丰富片段存在于 PPII 样构象中。该结果表明 TonB 的脯氨酸丰富片段具有超过 15nm 的长度,足以跨越革兰氏阴性菌的周质空间。

相似文献

1
The proline-rich domain of TonB possesses an extended polyproline II-like conformation of sufficient length to span the periplasm of Gram-negative bacteria.TonB 富含脯氨酸的结构域具有足够长度的伸展型多聚脯氨酸 II 样构象,可跨越革兰氏阴性菌的周质。
Protein Sci. 2010 Apr;19(4):625-30. doi: 10.1002/pro.345.
2
TonB-dependent receptors-structural perspectives.托蛋白B依赖型受体——结构视角
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Structural intermediates observed only in intact indicate a mechanism for TonB-dependent transport.仅在完整状态下观察到的结构中间体表明了一种依赖托品B的转运机制。
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5
TonB protein and energy transduction between membranes.托普辛蛋白与膜间的能量转导
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TonB and the gram-negative dilemma.托蛋白与革兰氏阴性菌难题。
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Substrate-dependent unfolding of the energy coupling motif of a membrane transport protein determined by double electron-electron resonance.通过双电子-电子共振确定的膜转运蛋白能量偶联基序的底物依赖性去折叠
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本文引用的文献

1
New substrates for TonB-dependent transport: do we only see the 'tip of the iceberg'?托蛋白B依赖性转运的新底物:我们看到的只是“冰山一角”吗?
Trends Biochem Sci. 2008 Jul;33(7):330-8. doi: 10.1016/j.tibs.2008.04.012. Epub 2008 Jun 6.
2
Insight from TonB hybrid proteins into the mechanism of iron transport through the outer membrane.来自TonB杂合蛋白对铁通过外膜转运机制的见解。
J Bacteriol. 2008 Jun;190(11):4001-16. doi: 10.1128/JB.00135-08. Epub 2008 Apr 4.
3
The solution structure of the periplasmic domain of the TonB system ExbD protein reveals an unexpected structural homology with siderophore-binding proteins.TonB系统ExbD蛋白周质结构域的溶液结构揭示了与铁载体结合蛋白意想不到的结构同源性。
Mol Microbiol. 2007 Nov;66(4):872-89. doi: 10.1111/j.1365-2958.2007.05957.x. Epub 2007 Oct 10.
4
Structural basis for polyproline recognition by the FE65 WW domain.FE65 WW 结构域识别多聚脯氨酸的结构基础。
J Mol Biol. 2007 Sep 28;372(4):970-980. doi: 10.1016/j.jmb.2007.06.064. Epub 2007 Jun 29.
5
Long-range distance determinations in biomacromolecules by EPR spectroscopy.利用电子顺磁共振波谱法测定生物大分子中的远程距离
Q Rev Biophys. 2007 Feb;40(1):1-53. doi: 10.1017/S003358350700460X. Epub 2007 Jun 13.
6
Mechanics of force propagation in TonB-dependent outer membrane transport.托蛋白B依赖型外膜转运中力传播的机制
Biophys J. 2007 Jul 15;93(2):496-504. doi: 10.1529/biophysj.107.104158. Epub 2007 Apr 20.
7
Distance measurements on spin-labelled biomacromolecules by pulsed electron paramagnetic resonance.通过脉冲电子顺磁共振对自旋标记生物大分子进行距离测量。
Phys Chem Chem Phys. 2007 Apr 28;9(16):1895-910. doi: 10.1039/b614920k. Epub 2007 Jan 23.
8
Structure of TonB in complex with FhuA, E. coli outer membrane receptor.与大肠杆菌外膜受体FhuA结合的TonB的结构
Science. 2006 Jun 2;312(5778):1399-402. doi: 10.1126/science.1128057.
9
Outer membrane active transport: structure of the BtuB:TonB complex.外膜主动运输:BtuB与TonB复合物的结构
Science. 2006 Jun 2;312(5778):1396-9. doi: 10.1126/science.1127694.
10
The solution structure of the C-terminal domain of TonB and interaction studies with TonB box peptides.托恩B蛋白C末端结构域的溶液结构及其与托恩B盒肽的相互作用研究
J Mol Biol. 2005 Feb 4;345(5):1185-97. doi: 10.1016/j.jmb.2004.11.026. Epub 2004 Dec 15.