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根瘤菌菌株的质粒电穿孔:限制基因 hsdR 在模式菌株 Rm1021 中的作用。

Plasmid electroporation of Sinorhizobium strains: The role of the restriction gene hsdR in type strain Rm1021.

机构信息

Dept. of Evolutionary Biology, University of Florence, via Romana 17-19, I-50125 Firenze, Italy.

出版信息

Plasmid. 2010 May;63(3):128-35. doi: 10.1016/j.plasmid.2010.01.001. Epub 2010 Jan 22.

Abstract

Although horizontal gene transfer mediated by plasmids is important to the generation of the genetic variability of Sinorhizobium strains, the barriers which can reduce horizontal gene transfer between bacteria have not yet been studied in Sinorhizobium. We studied the plasmid transfer by electroporation and its restriction in strains of Sinorhizobium meliloti and S. medicae. After conditions for electroporation were established, three S. meliloti strains (including the sequenced type strain Rm1021) and two S. medicae strains were electroporated with plasmid DNA extracted from strains of both species. The efficiency of transformation was found to be variable among different strains. The acquisition of plasmid DNA was found to be donor-dependent in S. meliloti strain Rm1021 that prefers self-DNA more than the DNA from other Sinorhizobium strains. All other strains tested did not show a preference for self-DNA. In strain Rm1021, the inactivation of the hsdR gene, coding for a putative type-I restriction enzyme, increased the efficiency of transformation and conjugation with non-self DNA; the transformation capability was again reduced in hsdR mutant when the cloned hsdR gene was expressed from a lac promoter. Phylogenetic analysis of the hsdR gene clearly indicated that this gene was horizontally transferred to strain Rm1021, explaining its absence in the other strains tested.

摘要

尽管质粒介导的水平基因转移对根瘤菌菌株遗传变异性的产生很重要,但根瘤菌中还没有研究能够减少细菌间水平基因转移的障碍。我们研究了电穿孔介导的质粒转移及其在苜蓿中华根瘤菌和 Medicago 根瘤菌菌株中的限制。在建立了电穿孔条件后,用从两种菌株中提取的质粒 DNA 电穿孔了三个苜蓿中华根瘤菌菌株(包括已测序的标准株 Rm1021)和两个 Medicago 根瘤菌菌株。发现不同菌株之间的转化效率存在差异。在苜蓿中华根瘤菌菌株 Rm1021 中,发现质粒 DNA 的获得是供体依赖性的,该菌株更喜欢自身 DNA 而不是其他根瘤菌菌株的 DNA。测试的所有其他菌株均未显示出对自身 DNA 的偏好。在菌株 Rm1021 中,hsdR 基因(编码一种假定的 I 型限制酶)的失活增加了与非自身 DNA 的转化和接合效率;当从 lac 启动子表达克隆的 hsdR 基因时,hsdR 突变体的转化能力再次降低。hsdR 基因的系统发育分析清楚地表明,该基因是水平转移到菌株 Rm1021 的,这解释了它在测试的其他菌株中的缺失。

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