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花粉诱导矮牵牛花瓣衰老过程中的蛋白质组学分析。

Proteomic analysis of pollination-induced corolla senescence in petunia.

机构信息

Department of Horticulture and Crop Science, The Ohio State University, OARDC, Wooster, Ohio 44691, USA.

出版信息

J Exp Bot. 2010 Feb;61(4):1089-109. doi: 10.1093/jxb/erp373. Epub 2010 Jan 28.

DOI:10.1093/jxb/erp373
PMID:20110265
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2826652/
Abstract

Senescence represents the last phase of petal development during which macromolecules and organelles are degraded and nutrients are recycled to developing tissues. To understand better the post-transcriptional changes regulating petal senescence, a proteomic approach was used to profile protein changes during the senescence of Petuniaxhybrida 'Mitchell Diploid' corollas. Total soluble proteins were extracted from unpollinated petunia corollas at 0, 24, 48, and 72 h after flower opening and at 24, 48, and 72 h after pollination. Two-dimensional gel electrophoresis (2-DE) was used to identify proteins that were differentially expressed in non-senescing (unpollinated) and senescing (pollinated) corollas, and image analysis was used to determine which proteins were up- or down-regulated by the experimentally determined cut-off of 2.1-fold for P <0.05. One hundred and thirty-three differentially expressed protein spots were selected for sequencing. Liquid chromatography-tandem mass spectrometry (LC-MS/MS) was used to determine the identity of these proteins. Searching translated EST databases and the NCBI non-redundant protein database, it was possible to assign a putative identification to greater than 90% of these proteins. Many of the senescence up-regulated proteins were putatively involved in defence and stress responses or macromolecule catabolism. Some proteins, not previously characterized during flower senescence, were identified, including an orthologue of the tomato abscisic acid stress ripening protein 4 (ASR4). Gene expression patterns did not always correlate with protein expression, confirming that both proteomic and genomic approaches will be required to obtain a detailed understanding of the regulation of petal senescence.

摘要

衰老代表花瓣发育的最后阶段,在此期间大分子和细胞器被降解,营养物质被回收并重新分配到正在发育的组织中。为了更好地理解调控花瓣衰老的转录后变化,采用蛋白质组学方法来分析拟南芥‘Mitchell Diploid’花瓣衰老过程中的蛋白质变化。从未授粉的矮牵牛花瓣中提取总可溶性蛋白,在开花后 0、24、48 和 72 小时以及授粉后 24、48 和 72 小时分别取样。使用二维凝胶电泳(2-DE)来鉴定在非衰老(未授粉)和衰老(授粉)花瓣中差异表达的蛋白质,并用图像分析来确定哪些蛋白质被上调或下调,实验确定的截止值为 2.1 倍,P<0.05。选择 133 个差异表达的蛋白质斑点进行测序。采用液相色谱-串联质谱(LC-MS/MS)来确定这些蛋白质的身份。搜索翻译后的 EST 数据库和 NCBI 非冗余蛋白质数据库,超过 90%的这些蛋白质可以被赋予一个假定的鉴定。许多衰老上调的蛋白质被假定参与防御和应激反应或大分子的分解代谢。一些在花衰老过程中以前没有被描述的蛋白质被鉴定出来,包括番茄脱落酸应激成熟蛋白 4(ASR4)的同源物。基因表达模式并不总是与蛋白质表达相关,这证实了蛋白质组学和基因组学方法都将被需要,以获得对花瓣衰老调控的详细理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2496/2826652/c2c1bd9ab71d/jexboterp373f06_lw.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2496/2826652/99e639d33893/jexboterp373f01_3c.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2496/2826652/67ec6b3dc621/jexboterp373f04_3c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2496/2826652/a080413d61b9/jexboterp373f05_ht.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2496/2826652/c2c1bd9ab71d/jexboterp373f06_lw.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2496/2826652/99e639d33893/jexboterp373f01_3c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2496/2826652/f6fea94f7e88/jexboterp373f02_ht.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2496/2826652/9190fe788ff0/jexboterp373f03_ht.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2496/2826652/67ec6b3dc621/jexboterp373f04_3c.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2496/2826652/c2c1bd9ab71d/jexboterp373f06_lw.jpg

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