Departments of Internal Medicine and Pathology, University of Utah School of Medicine, 375 Chipeta Way, Suite A, Salt Lake City, UT 84108, USA.
Cancer Res. 2010 Feb 15;70(4):1479-85. doi: 10.1158/0008-5472.CAN-08-1792. Epub 2010 Feb 2.
Genome-wide association studies (GWAS) have identified SMAD7 on 8q21 as being associated with colorectal cancer. We evaluated single nucleotide polymorphisms (SNP) in the SMAD7 gene, including rs4939827, rs12953717, and rs4464148, previously identified from GWAS in a large population-based case-control study of colon cancer. We observed that rs12953717 was associated with a statistically significant increased risk of colon cancer [odds ratio, 1.38; 95% confidence intervals (CI), 1.13-1.68; P linear trend < 0.01] for the TT genotype compared with the CC genotype, whereas the CC genotype of the rs4939827 SNP was inversely associated with colon cancer (0.77; 95% CI, 0.64-0.93) relative to the TT genotype. There were no significant differences in association for either of these polymorphisms when stratified by age, tumor site, sex, or family history. The odds ratios between SMAD7 and colon cancer among individuals reporting recent aspirin/nonsteroidal anti-inflammatory drug use was 0.60 (95% CI, 0.43-0.85) for the CC genotype of the rs4939827 polymorphism and 1.69 (95% CI, 1.20-2.38) for the TT genotype of the rs1295371 polymorphism. This result compares to odds ratios of 0.86 (95% CI, 0.68-1.09) for rs4939827 and 1.22 (95% CI, 0.96-1.56) among individuals who did not use aspirin/nonsteroidal anti-inflammatory drugs. An assessment of SMAD7 genotypes with tumor markers did not reveal any significant differences by KRAS2, TP53, CpG island methylator phenotype, or microsatellite instability status. No significant associations were observed for the rs4464148 SNP or other SNPs evaluated in the SMAD7. These results corroborate the findings of GWAS in colon cancer pointing to SMAD7 and reinforce interest in SNPs in this gene.
全基因组关联研究(GWAS)已经确定 8q21 上的 SMAD7 与结直肠癌有关。我们评估了 SMAD7 基因中的单核苷酸多态性(SNP),包括之前在一项大型基于人群的结肠癌病例对照研究的 GWAS 中发现的 rs4939827、rs12953717 和 rs4464148。我们观察到 rs12953717 与结肠癌的风险呈统计学显著增加相关[比值比,1.38;95%置信区间(CI),1.13-1.68;P 线性趋势<0.01],与 TT 基因型相比,CC 基因型,而 rs4939827 SNP 的 CC 基因型与结肠癌呈负相关(0.77;95%CI,0.64-0.93)与 TT 基因型相比。当按年龄、肿瘤部位、性别或家族史分层时,这两种多态性均无显著相关性差异。在报告最近使用阿司匹林/非甾体抗炎药的个体中,SMAD7 与结肠癌之间的比值比为 rs4939827 多态性的 CC 基因型为 0.60(95%CI,0.43-0.85),rs1295371 多态性的 TT 基因型为 1.69(95%CI,1.20-2.38)。这一结果与 rs4939827 的比值比为 0.86(95%CI,0.68-1.09)相比,在未使用阿司匹林/非甾体抗炎药的个体中,rs1295371 的比值比为 1.22(95%CI,0.96-1.56)。对 SMAD7 基因型与肿瘤标志物的评估显示,KRAS2、TP53、CpG 岛甲基化表型或微卫星不稳定性状态无显著差异。rs4464148 SNP 或评估的其他 SMAD7 SNP 均未观察到显著相关性。这些结果证实了 GWAS 在结肠癌中的发现指向 SMAD7,并加强了对该基因中 SNP 的关注。