Medical Genomics Research Center, KRIBB, Daejeon 305-806, Republic of Korea.
J Microbiol. 2009 Dec;47(6):789-95. doi: 10.1007/s12275-009-0010-4. Epub 2010 Feb 4.
An immediate challenge in the post-genomic era is to assign a biological functions to proteins unraveled by genome analysis. This report is based on studies conducted using Schizosaccharomyces pombe, a simple model organism, and presents various vector systems as tools for high-throughput functional analysis of human genes. We constructed S. pombe expression vectors for efficient cloning of genes via the Gateway system. We modified the pREP and pSLF series vectors, which are widely used for gene expression in S. pombe. The vectors constructed have a uniform backbone of S. pombe autonomously replicating sequence (ARS) elements with different selective markers, namely, urw4 (+) and Saccharomyces cerevisiae LEU2 complementing leul. These vectors contain 3 different strengths of the inducible promoter nmtl, which affect the expression levels of the cloned open reading frames (ORFs). Further, target proteins can be fused with an N-terminal or C-terminal tag such as triple hemagglutinin (3x HA), enhanced green fluorescent protein (EGFP), or Discosoma red fluorescent protein (DsRed). We tested the feasibility of the constructed vectors by using 3 human genes, namely, RAB18, SCC-112, and PTEN. Proper expression of tagged RAB18 was confirmed by western blot analysis. Further, localization of RAB18, SCC112, and PTEN was demonstrated. The constructed vectors can be utilized for high-throughput functional analysis of heterologous genes.
在后基因组时代,面临的一个直接挑战是对通过基因组分析揭示的蛋白质赋予生物学功能。本报告基于利用简单模式生物裂殖酵母进行的研究,介绍了各种载体系统,这些系统可作为高通量分析人类基因功能的工具。我们构建了裂殖酵母表达载体,通过 Gateway 系统有效地克隆基因。我们对广泛用于裂殖酵母基因表达的 pREP 和 pSLF 系列载体进行了修饰。构建的载体具有统一的裂殖酵母自主复制序列(ARS)元件骨架,带有不同的选择性标记,即 urw4(+)和酿酒酵母 LEU2 互补 leul。这些载体包含 3 种不同强度的诱导启动子 nmtl,可影响克隆开放阅读框(ORF)的表达水平。此外,目标蛋白可以与 N 端或 C 端标签融合,如三血球凝集素(3xHA)、增强型绿色荧光蛋白(EGFP)或 Discosoma 红色荧光蛋白(DsRed)。我们通过使用 3 个人类基因,即 RAB18、SCC-112 和 PTEN,测试了构建载体的可行性。通过 Western blot 分析证实了标记的 RAB18 的正确表达。进一步证明了 RAB18、SCC112 和 PTEN 的定位。构建的载体可用于高通量分析异源基因的功能。