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本文引用的文献

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Mechanoenzymatic cleavage of the ultralarge vascular protein von Willebrand factor.超大型血管蛋白血管性血友病因子的机械酶解作用
Science. 2009 Jun 5;324(5932):1330-4. doi: 10.1126/science.1170905.
2
DNA relaxation dynamics as a probe for the intracellular environment.DNA松弛动力学作为细胞内环境的一种探测手段。
Proc Natl Acad Sci U S A. 2009 Jun 9;106(23):9250-5. doi: 10.1073/pnas.0812723106. Epub 2009 May 28.
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Protein architecture of the human kinetochore microtubule attachment site.人类动粒微管附着位点的蛋白质结构
Cell. 2009 May 15;137(4):672-84. doi: 10.1016/j.cell.2009.03.035.
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From promiscuity to precision: protein phosphatases get a makeover.从杂乱无章到精准无误:蛋白磷酸酶焕然一新。
Mol Cell. 2009 Mar 13;33(5):537-45. doi: 10.1016/j.molcel.2009.02.015.
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Condensin regulates the stiffness of vertebrate centromeres.凝缩蛋白调节脊椎动物着丝粒的硬度。
Mol Biol Cell. 2009 May;20(9):2371-80. doi: 10.1091/mbc.e08-11-1127. Epub 2009 Mar 4.
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Forces and torques in the nucleus: chromatin under mechanical constraints.细胞核中的力与扭矩:处于机械约束下的染色质
Biochem Cell Biol. 2009 Feb;87(1):307-22. doi: 10.1139/O08-123.
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Cell fate regulation by coupling mechanical cycles to biochemical signaling pathways.通过将机械循环与生化信号通路相结合来调控细胞命运
Curr Opin Cell Biol. 2009 Feb;21(1):38-46. doi: 10.1016/j.ceb.2009.01.002. Epub 2009 Feb 11.
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Mechanotransduction at a distance: mechanically coupling the extracellular matrix with the nucleus.远距离机械转导:将细胞外基质与细胞核进行机械偶联
Nat Rev Mol Cell Biol. 2009 Jan;10(1):75-82. doi: 10.1038/nrm2594.
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Stretching single talin rod molecules activates vinculin binding.拉伸单个踝蛋白杆状分子可激活纽蛋白结合。
Science. 2009 Jan 30;323(5914):638-41. doi: 10.1126/science.1162912.
10
Structure of a protein phosphatase 2A holoenzyme: insights into B55-mediated Tau dephosphorylation.蛋白磷酸酶2A全酶的结构:对B55介导的 Tau 去磷酸化的见解
Mol Cell. 2008 Sep 26;31(6):873-85. doi: 10.1016/j.molcel.2008.08.006.

PR65,磷酸酶 PP2A 的 HEAT 重复支架,是一个连接力和催化的弹性接头。

PR65, the HEAT-repeat scaffold of phosphatase PP2A, is an elastic connector that links force and catalysis.

机构信息

Departments of Molecular and Cellular Biology, and Chemistry and Chemical Biology, Harvard University, Cambridge, MA 02138, USA.

出版信息

Proc Natl Acad Sci U S A. 2010 Feb 9;107(6):2467-72. doi: 10.1073/pnas.0914073107. Epub 2010 Jan 25.

DOI:10.1073/pnas.0914073107
PMID:20133745
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2823866/
Abstract

PR65 is the two-layered (alpha-alpha solenoid) HEAT-repeat (Huntingtin, elongation factor 3, a subunit of protein phosphatase 2A, PI3 kinase target of rapamycin 1) scaffold of protein phosphatase PP2A. Molecular dynamics simulations predict that, at forces expected in living systems, PR65 undergoes (visco-)elastic deformations in response to pulling/pushing on its ends. At lower forces, smooth global flexural and torsional changes occur via even redistribution of stress along the hydrophobic core of the molecule. At intermediate forces, helix-helix separation along one layer ("fracturing") leads to global relaxation plus loss of contact in the other layer to unstack the affected units. Fracture sites are determined by unusual sequences in contiguous interhelix turns. Normal mode analysis of the heterotrimeric PP2A enzyme reveals that its ambient conformational fluctuations are dominated by elastic deformations of PR65, which introduce a mechanical linkage between the separately bound regulatory and catalytic subunits. PR65-dominated fluctuations of PP2A have the effect of opening and closing the enzyme's substrate binding/catalysis interface, as well as altering the positions of certain catalytic residues. These results suggest that substrate binding/catalysis are sensitive to mechanical force. Force could be imposed from the outside (e.g., in PP2A's response to spindle tension) or arise spontaneously (e.g., in PP2A's interaction with unstructured proteins such as Tau, a microtubule-associated Alzheimer's-implicated protein). The presented example supports the view that conformation and function of protein complexes can be modulated by mechanical energy inputs, as well as by chemical energy inputs from ligand binding. Given that helical-repeat proteins are involved in many cellular processes, the findings also encourage the view that mechanical forces may be of widespread importance.

摘要

PR65 是由两层(α-α 螺线管)HEAT 重复序列(亨廷顿蛋白、延伸因子 3、蛋白磷酸酶 2A 的亚基、雷帕霉素靶蛋白 1 的 PI3 激酶)构成的蛋白磷酸酶 PP2A 支架。分子动力学模拟预测,在活系统中预期的力作用下,PR65 在其两端受到拉/推时会发生(粘弹)变形。在较低的力下,通过分子疏水性核心中应力的均匀再分配,会发生平滑的全局挠曲和扭转变化。在中等力下,一层中的螺旋-螺旋分离(“断裂”)导致全局松弛以及另一层中接触的丧失以解叠受影响的单元。断裂部位由连续的螺旋间转角中的异常序列决定。杂三聚体 PP2A 酶的正常模态分析表明,其环境构象波动主要由 PR65 的弹性变形主导,这在单独结合的调节和催化亚基之间引入了机械连接。PR65 主导的 PP2A 波动会打开和关闭酶的底物结合/催化界面,并改变某些催化残基的位置。这些结果表明,底物结合/催化对机械力敏感。力可以从外部施加(例如,在 PP2A 对纺锤张力的反应中),也可以自发产生(例如,在 PP2A 与非结构化蛋白如 Tau 的相互作用中,Tau 是一种与微管相关的阿尔茨海默病相关蛋白)。所提出的例子支持这样一种观点,即蛋白质复合物的构象和功能可以通过机械能量输入以及配体结合的化学能量输入来调节。鉴于螺旋重复蛋白参与许多细胞过程,这些发现也鼓励这样一种观点,即机械力可能具有广泛的重要性。