Department of Biochemical Engineering and Biotechnology, Indian Institute of Technology Delhi, Hauz Khas, New Delhi 110016, India.
Biochimie. 2010 May;92(5):491-8. doi: 10.1016/j.biochi.2010.01.009. Epub 2010 Feb 4.
The equilibrium and kinetics studies of an 82 kDa large monomeric Escherichia coli protein Malate Synthase G (MSG) was investigated by far and near-UV CD, intrinsic tryptophan fluorescence and extrinsic fluorescence spectroscopy. We find that despite of its large size, folding is reversible, in vitro. Equilibrium unfolding process of MSG exhibited three-state transition thus, indicating the presence of at least a stable equilibrium intermediate. Thermodynamic parameters suggest this intermediate resembles the unfolded state. However, the equilibrium intermediate exhibits pronounced secondary structure as measured by far-UV CD, partial tertiary structure as delineated by near-UV CD, compactness (m value) and exposed hydrophobic surface area as assessed by ANS binding, typically depicting a molten globule state. The stopped-flow kinetic data provide clear evidence for the presence of a burst phase during the refolding pathway due to the formation of an early Intermediate, within the dead time of the instrument. Refolding from 4 M to various lower concentrations until 0.4 M of GdnHCl follow biphasic kinetics at lower concentrations of GdnHCl (<0.8 M), whereas monophasic kinetics at concentrations above 1.5 M. Also, rollover in the refolding and unfolding limbs of chevron plot verifies the presence of a fast kinetic intermediate at lower concentration of GdnHCl. Based upon the above observations we hereby propose the folding pathway of a large multi-domain protein Malate Synthase G.
采用远紫外和近紫外圆二色性、内源色氨酸荧光和外源荧光光谱法研究了 82 kDa 大肠杆菌单体苹果酸合成酶 G(MSG)的平衡和动力学性质。我们发现,尽管 MSG 分子量较大,但它在体外的折叠是可逆的。MSG 的平衡解折叠过程呈现出三态转变,因此,表明至少存在一个稳定的平衡中间态。热力学参数表明该中间态类似于展开状态。然而,平衡中间态表现出显著的二级结构,如远紫外圆二色性所测,部分三级结构如近紫外圆二色性所描绘,以及通过 ANS 结合评估的紧凑性(m 值)和暴露的疏水性表面积,通常描绘出一种无规卷曲状态。停流动力学数据提供了明确的证据,表明在复性途径中存在爆发相,这是由于在仪器的死时间内形成了早期中间态。从 4 M 到各种较低浓度(直到 0.4 M 的 GdnHCl)的复性在较低浓度的 GdnHCl(<0.8 M)下遵循双相动力学,而在浓度高于 1.5 M 时遵循单相动力学。此外,在 Chevron 图的复性和展开支上的翻转验证了在较低浓度的 GdnHCl 下存在快速动力学中间态。基于上述观察,我们提出了一种大型多结构域蛋白苹果酸合成酶 G 的折叠途径。