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利用 ITS1 和 ITS2 序列对科威特湾的 Probolocoryphe uca(Sarkisian,1957;Digenea:Microphallidae)进行分子鉴定。

Molecular identification of Probolocoryphe uca (Sarkisian, 1957; Digenea: Microphallidae) from Kuwait Bay using ITS1 and ITS2 sequences.

机构信息

Department of Biological Sciences, Faculty of Science, Kuwait University, PO Box 5069, Safat, 13060, Kuwait.

出版信息

Parasitol Res. 2010 Apr;106(5):1189-95. doi: 10.1007/s00436-010-1778-1. Epub 2010 Feb 9.

Abstract

Probolocoryphe species occur primarily as intestinal parasites of birds and mammals. Infection of the crab Nanosesarma minutum with the metacercarial cyst stages of Probolocoryphe uca is common in Kuwait Bay. In this study, the snail Cerithidea cingulata was used to determine if it would serve as first intermediate host in the parasite's life cycle. To determine the snail-crab link in the life cycle of P. uca based on rDNA molecular data, ribosomal internal transcribed spacer (ITS) regions of the metacercarial cyst stage from the crab N. minutum and the sporocyst stage from the snail C. cingulata were sequenced and compared. Sequence alignment clearly demonstrated that the sporocysts and metacercariae belonged to P. uca. Comparisons were also made between the ITS sequences of P. uca and other digenean species available in GenBank. NCBI databases were used for sequence homology analysis using BLAST, ClustalW, and MUSCLE. The phylogenetic trees based on the homology analysis of the ITS (1 and 2) sequences constructed using PHYLIP and MEGA 4.0 confirmed the identification and positioned P. uca in the Microphallidae family.

摘要

Probolocoryphe 物种主要作为鸟类和哺乳动物的肠道寄生虫出现。在科威特湾,螃蟹 Nanosesarma minutum 感染 Probolocoryphe uca 的囊蚴阶段很常见。在这项研究中,使用 Cerithidea cingulata 蜗牛来确定它是否会成为寄生虫生命周期中的第一中间宿主。为了根据 rDNA 分子数据确定 P. uca 的螺-蟹联系,对来自螃蟹 N. minutum 的囊蚴阶段和来自 Cerithidea cingulata 的孢囊阶段的核糖体内部转录间隔区(ITS)区域进行了测序和比较。序列比对清楚地表明,孢囊和囊蚴属于 P. uca。还比较了 GenBank 中其他双腔吸虫物种的 ITS 序列。使用 NCBI 数据库使用 BLAST、ClustalW 和 MUSCLE 进行序列同源性分析。使用 PHYLIP 和 MEGA 4.0 构建的基于 ITS(1 和 2)序列同源性分析的系统发育树证实了鉴定,并将 P. uca 定位在微腔科中。

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