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基于眼虫的畏光反应并结合光反馈刺激的神经计算模拟。

Simulation of neurocomputing based on the photophobic reactions of Euglena with optical feedback stimulation.

作者信息

Ozasa Kazunari, Aono Masashi, Maeda Mizuo, Hara Masahiko

机构信息

Advanced Science Institute, RIKEN, Wako, Saitama, Japan.

出版信息

Biosystems. 2010 May;100(2):101-7. doi: 10.1016/j.biosystems.2010.02.002. Epub 2010 Feb 10.

DOI:10.1016/j.biosystems.2010.02.002
PMID:20149839
Abstract

To explore possible forms of unconventional computers that have high capacities for adaptation and exploration, we propose a new approach to developing a biocomputer based on the photophobic reactions of microbes (Euglena gracilis), and perform the Monte-Carlo simulation of Euglena-based neural network computing, involving virtual optical feedback to the Euglena cells. The photophobic reactions of Euglena are obtained experimentally, and incorporated in the simulation, together with a feedback algorithm with a modified Hopfield-Tank model for solving a 4-city traveling salesman problem. The simulation shows high performances in terms of (1) reaching one of the best solutions of the problem, and (2) searching for a number of solutions via dynamic transition among the solutions. This dynamic transition is attributed to the fluctuation of state variables, global oscillation through feedback instability, and the one-by-one change of state variables.

摘要

为了探索具有高适应和探索能力的非传统计算机的可能形式,我们提出了一种基于微生物(纤细裸藻)的避光反应开发生物计算机的新方法,并对基于裸藻的神经网络计算进行了蒙特卡罗模拟,其中涉及对裸藻细胞的虚拟光反馈。通过实验获得了裸藻的避光反应,并将其与用于解决4城市旅行商问题的具有改进霍普菲尔德-坦克模型的反馈算法一起纳入模拟。模拟结果在以下方面表现出高性能:(1)找到该问题的最佳解决方案之一;(2)通过解决方案之间的动态转换搜索多个解决方案。这种动态转换归因于状态变量的波动、反馈不稳定性导致的全局振荡以及状态变量的逐个变化。

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Biosystems. 2010 May;100(2):101-7. doi: 10.1016/j.biosystems.2010.02.002. Epub 2010 Feb 10.
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引用本文的文献

1
Autonomous oscillation/separation of cell density artificially induced by optical interlink feedback as designed interaction between two isolated microalgae chips.通过光学互连反馈人工诱导的细胞密度自主振荡/分离,作为两个独立微藻芯片之间的设计相互作用。
Sci Rep. 2016 Apr 21;6:24602. doi: 10.1038/srep24602.