Laboratory for Chiroptical Structure Analysis, Institute of Chemistry, Eötvös Loránd University, Budapest, Hungary.
Chirality. 2010 Aug;22(8):762-71. doi: 10.1002/chir.20831.
The optical spectroscopic characterization of gamma-turns in solution is uncertain and their distinction from beta-turns is often difficult. This work reports systematic ECD and vibrational circular dichroism (VCD) spectroscopic studies on gamma-turn model cyclic tetrapeptides cyclo(Ala-beta-Ala-Pro-beta-Ala) (1), cyclo(Pro-beta-Ala-Pro-beta-Ala) (2) and cyclo(Ala-beta-Ala-Ala-beta-Ala) (3). Conformational analysis performed at the 6-31G(d)/B3LYP level of theory using an adequate PCM solvent model predicted one predominant conformer for 1-3, featuring two inverse gamma-turns. The ECD spectra in ACN of 1 and 2 are characterized by a negative n-->pi* band near 230 nm and a positive pi-->pi* band below 200 nm with a long wavelength shoulder. The ECD spectra in TFE of 1-3 show similar spectra with blue-shifted bands. The VCD spectra in ACN-d(3) of 1 and 2 show a +/-/+/- amide I sign pattern resulting from four uncoupled vibrations in the case of 1 and a sequence of two positive couplets in the case of 2. A -/+/+/- amide I VCD pattern was measured for 3 in TFE-d(2). All three peptides give a positive couplet or couplet-like feature (+/-) in the amide II region. VCD spectroscopy, in agreement with theoretical calculations revealed that low frequency amide I vibrations (at approximately 1630 cm(-1) or below) are indicative of a C(7) H-bonded inverse gamma-turns with Pro in position 2, while gamma-turns encompassing Ala absorb at higher frequency (above 1645 cm(-1)).
溶液中环γ-转角的光学光谱特征不确定,且其与β-转角的区分通常较为困难。本工作报道了对γ-转角模型环四肽环(Ala-β-Ala-Pro-β-Ala)(1)、环(Pro-β-Ala-Pro-β-Ala)(2)和环(Ala-β-Ala-Ala-β-Ala)(3)的系统ECD 和振动圆二色性(VCD)光谱研究。在使用适当的 PCM 溶剂模型的 6-31G(d)/B3LYP 理论水平上进行构象分析,预测 1-3 的主要构象为两个反向γ-转角。1 和 2 的 ACN 中的 ECD 光谱特征为在 230nm 附近的负 n→π带和在 200nm 以下的正π→π带,其具有长波肩。1-3 在 TFE 中的 ECD 光谱显示具有蓝移带的相似光谱。1 和 2 在 ACN-d(3)中的 VCD 光谱显示酰胺 I 信号模式为 +/-/+/-,这是由于 1 中四个未偶联振动的结果,而 2 中则为两个正偶联的序列。在 TFE-d(2)中,3 测量到酰胺 I VCD 模式为 -/+/+/-。所有三种肽在酰胺 II 区域均给出正偶联或偶联样特征(±)。VCD 光谱学与理论计算一致,表明低频酰胺 I 振动(约 1630cm-1 或更低)表明具有 Pro 在位置 2 的 C(7) H-键合反向γ-转角,而包含 Ala 的γ-转角在更高频率处吸收(高于 1645cm-1)。