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基于 MGB 探针的诊断方法,用于快速检测和同时区分禽副黏病毒 1 型的毒力株和疫苗株。

A diagnostic method based on MGB probes for rapid detection and simultaneous differentiation between virulent and vaccine strains of avian paramyxovirus type 1.

机构信息

Virology Unit, Institute for Microbiology and Parasitology, Veterinary Faculty, University of Ljubljana, Gerbiceva 60, SI-1115 Ljubljana, Slovenia.

出版信息

J Virol Methods. 2010 Jun;166(1-2):28-36. doi: 10.1016/j.jviromet.2010.02.012. Epub 2010 Feb 17.

DOI:10.1016/j.jviromet.2010.02.012
PMID:20170680
Abstract

Newcastle disease virus (NDV), also designated avian paramyxovirus type 1 (APMV-1), is a serious pathogen of poultry, causing highly contagious Newcastle disease (ND), with high morbidity or mortality, depending on the strain. Accordingly, rapid and reliable detection of APMV-1 and differentiation between vaccine and virulent strains is of crucial importance for ND diagnosis and plays an important role in effective control of the disease. In this study, two real-time reverse transcription polymerase chain reaction (real-time RT-PCR) assays using minor groove-binding (MGB) probes were developed for broad range detection and simultaneous pathotyping of APMV-1. The two assays were evaluated for their ability to detect in allantoic fluids viral RNA of all known APMV-1 lineages. Additionally, the applicability of the developed assays was assessed by the detection and pathotype prediction of APMV-1 in swabs and organs. The assays demonstrated high analytical specificity, sensitivity and good reproducibility, with coefficients of variation ranging from 0.2% to 3.9% and from 0.6% to 7.2% for intra-assay and inter-assay variability, respectively. The results indicated the suitability of both assays as a complementary method for rapid screening and typing of APMV-1.

摘要

新城疫病毒(NDV),也称为禽副黏病毒 1 型(APMV-1),是家禽的一种严重病原体,可引起高度传染性的新城疫(ND),其发病率或死亡率取决于毒株。因此,快速可靠地检测 APMV-1 并区分疫苗株和强毒株对于 ND 的诊断至关重要,对有效控制疾病也具有重要作用。在本研究中,开发了两种基于小沟结合(MGB)探针的实时逆转录聚合酶链反应(real-time RT-PCR)检测方法,用于广泛检测和同时对 APMV-1 进行定型。评估了这两种检测方法对所有已知 APMV-1 谱系的鸡胚尿囊液病毒 RNA 的检测能力。此外,还通过对拭子和器官中 APMV-1 的检测和预测,评估了开发检测方法的适用性。结果表明,这两种检测方法均适合作为 APMV-1 的快速筛选和定型的补充方法。

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