Department of Biotechnology and Life Science, Tokyo University of Agriculture and Technology, 2-24-16 Naka-cho, Koganei-shi, Tokyo 184-8588, Japan.
Protein Eng Des Sel. 2010 May;23(5):393-402. doi: 10.1093/protein/gzq010. Epub 2010 Feb 19.
Group II chaperonins exist in archaea and the eukaryotic cytosol, and mediate protein folding in an ATP-dependent manner. We have been studying the reaction mechanism of group II chaperonins using alpha chaperonin, the recombinant chaperonin alpha subunit homo-oligomer from a hyperthermophilic archaeon, Thermococcus sp. strain KS-1 (T. KS-1). Although the high stability and activity of T. KS-1 alpha chaperonin provided advantages for our study, its high thermophilicity caused the difficulty in using various analytical methods. To resolve this problem, we tried to adapt T. KS-1 alpha chaperonin to moderate temperatures by mutations. The comparison of amino acid sequences between 26 thermophilic and 17 mesophilic chaperonins showed that three amino acid replacements are likely responsible for the difference of their optimal temperatures. We introduced three single mutations and also their double combinations into T. KS-1 alpha chaperonin. Among them, K323R single mutant exhibited the improvements of the folding activity and the ATP-dependent conformational change ability at lower temperatures, such as 50 degrees C and 40 degrees C. Since K323 may secure helix 12 in the closed conformation by interacting with D198, the replacement of Lys to Arg likely induced the higher mobility of the built-in lid, resulting in the higher activity at relatively low temperatures.
II 型分子伴侣存在于古菌和真核细胞质中,以 ATP 依赖的方式介导蛋白质折叠。我们一直在使用来自嗜热古菌 Thermococcus sp. strain KS-1(T. KS-1)的重组α分子伴侣亚基同源寡聚体α 分子伴侣来研究 II 型分子伴侣的反应机制。尽管 T. KS-1α分子伴侣的高稳定性和活性为我们的研究提供了优势,但它的高热稳定性导致使用各种分析方法变得困难。为了解决这个问题,我们尝试通过突变使 T. KS-1α分子伴侣适应中温。26 种嗜热和 17 种中温分子伴侣的氨基酸序列比较表明,三个氨基酸替换可能是它们最适温度差异的原因。我们将三个单突变和它们的双组合引入 T. KS-1α分子伴侣中。其中,K323R 单突变体在较低温度(如 50°C 和 40°C)下表现出折叠活性和 ATP 依赖性构象变化能力的提高。由于 K323 可能通过与 D198 相互作用来确保封闭构象中的螺旋 12,赖氨酸替换为精氨酸可能导致内置盖的更高流动性,从而在相对较低的温度下具有更高的活性。