Plant Biology, University of Zürich, Zürich, Switzerland.
Mol Plant Microbe Interact. 2010 Apr;23(4):497-509. doi: 10.1094/MPMI-23-4-0497.
The Mla locus in barley (Hordeum vulgare) conditions isolate-specific immunity to the powdery mildew fungus (Blumeria graminis f. sp. hordei) and encodes intracellular coiled-coil (CC) domain, nucleotide-binding (NB) site, and leucine-rich repeat (LRR)-containing receptor proteins. Over the last decades, genetic studies in breeding material have identified a large number of functional resistance genes at the Mla locus. To study the structural and functional diversity of this locus at the molecular level, we isolated 23 candidate MLA cDNAs from barley accessions that were previously shown by genetic studies to harbor different Mla resistance specificities. Resistance activity was detected for 13 candidate MLA cDNAs in a transient gene-expression assay. Sequence alignment of the deduced MLA proteins improved secondary structure predictions, revealing four additional, previously overlooked LRR. Analysis of nucleotide diversity of the candidate and validated MLA cDNAs revealed 34 sites of positive selection. Recombination or gene conversion events were frequent in the first half of the gene but positive selection was also found when this region was excluded. The positively selected sites are all, except two, located in the LRR domain and cluster in predicted solvent-exposed residues of the repeats 7 to 15 and adjacent turns on the concave side of the predicted solenoid protein structure. This domain-restricted pattern of positively selected sites, together with the length conservation of individual LRR, suggests direct binding of effectors to MLA receptors.
大麦(Hordeum vulgare)中的 Mla 基因座控制着对白粉菌(Blumeria graminis f. sp. hordei)的分离特异性免疫,该基因座编码细胞内卷曲螺旋(CC)结构域、核苷酸结合(NB)位点和富含亮氨酸重复(LRR)的受体蛋白。在过去的几十年中,在育种材料的遗传研究中,已经在 Mla 基因座鉴定出了大量的功能抗性基因。为了在分子水平上研究该基因座的结构和功能多样性,我们从先前遗传研究表明具有不同 Mla 抗性特异性的大麦品种中分离出 23 个候选 MLA cDNA。在瞬时基因表达测定中,对 13 个候选 MLA cDNA 的抗性活性进行了检测。推断出的 MLA 蛋白的序列比对提高了二级结构预测,揭示了另外四个以前被忽视的 LRR。对候选和验证的 MLA cDNA 的核苷酸多样性分析显示有 34 个正选择位点。在基因的前半部分,重组或基因转换事件频繁发生,但当排除该区域时也发现了正选择。除了两个之外,所有的正选择位点都位于 LRR 结构域中,并聚集在预测的溶剂暴露的重复 7 到 15 的残基和预测的螺线管蛋白结构的凹面的相邻转弯处。这种受限于结构域的正选择位点模式,以及单个 LRR 的长度保守性,表明效应物直接与 MLA 受体结合。