Department of Biology, Dalhousie University, Halifax Nova Scotia, Canada.
BMC Evol Biol. 2010 Mar 8;10:67. doi: 10.1186/1471-2148-10-67.
The dynamic geological and climatic histories of temperate South America have played important roles in shaping the contemporary distributions and genetic diversity of endemic freshwater species. We use mitochondria and nuclear sequence variation to investigate the consequences of mountain barriers and Quaternary glacial cycles for patterns of genetic diversity in the diadromous fish Galaxias maculatus in Patagonia (approximately 300 individuals from 36 locations).
Contemporary populations of G. maculatus, east and west of the Andes in Patagonia, represent a single monophyletic lineage comprising several well supported groups. Mantel tests using control region data revealed a strong positive relationship when geographic distance was modeled according to a scenario of marine dispersal. (r = 0.69, P = 0.055). By contrast, direct distance between regions was poorly correlated with genetic distance (r = -0.05, P = 0.463). Hierarchical AMOVAs using mtDNA revealed that pooling samples according to historical (pre-LGM) oceanic drainage (Pacific vs. Atlantic) explained approximately four times more variance than pooling them into present-day drainage (15.6% vs. 3.7%). Further post-hoc AMOVA tests revealed additional genetic structure between populations east and west of the Chilean Coastal Cordillera (coastal vs. interior). Overall female effective population size appears to have remained relatively constant until roughly 0.5 Ma when population size rapidly increased several orders of magnitude [100x (60x-190x)] to reach contemporary levels. Maximum likelihood analysis of nuclear alleles revealed a poorly supported gene tree which was paraphyletic with respect to mitochondrial-defined haplogroups.
First diversifying in the central/north-west region of Patagonia, G. maculatus extended its range into Argentina via the southern coastal regions that join the Pacific and Atlantic oceans. More recent gene flow between northern populations involved the most ancient and most derived lineages, and was likely facilitated by drainage reversal(s) during one or more cooling events of the late Pleistocene. Overall female effective population size represents the end result of a widespread and several hundred-fold increase over approximately 0.5 Ma, spanning several climatic fluctuations of the Pleistocene. The minor influence of glacial cycles on the genetic structure and diversity of G. maculatus likely reflects the access to marine refugia during repeated bouts of global cooling. Evidence of genetic structure that was detected on a finer scale between lakes/rivers is most likely the result of both biological attributes (i.e., resident non-migratory behavior and/or landlocking and natal homing in diadromous populations), and the Coastal Cordillera as a dispersal barrier.
温带南美洲的动态地质和气候历史在塑造特有淡水物种的当代分布和遗传多样性方面发挥了重要作用。我们使用线粒体和核序列变异来研究山脉屏障和第四纪冰川周期对潘塔哥尼亚洄游鱼类 Galaxias maculatus 遗传多样性模式的影响(来自 36 个地点的大约 300 个个体)。
潘塔哥尼亚安第斯山脉以东和以西的当代 G. maculatus 种群代表了一个单一的单系谱系,由几个得到很好支持的群体组成。使用控制区数据进行的 Mantel 检验显示,当根据海洋扩散情景对地理距离进行建模时,存在强烈的正相关关系(r = 0.69,P = 0.055)。相比之下,区域之间的直接距离与遗传距离相关性较差(r = -0.05,P = 0.463)。使用 mtDNA 进行的分层 AMOVA 表明,根据历史(末次冰期前)海洋排水情况(太平洋与大西洋)将样本汇集在一起解释的方差约为根据当前排水情况(15.6%与 3.7%)将样本汇集在一起解释的方差的四倍。进一步的事后 AMOVA 检验显示,智利沿海山脉以东和以西的种群之间存在额外的遗传结构(沿海与内陆)。总体而言,雌性有效种群规模似乎一直保持相对稳定,直到大约 0.5 Ma 时,种群规模迅速增加了几个数量级[100x(60x-190x)],达到了当代水平。核等位基因最大似然分析显示,基因树支持度低,与线粒体定义的单倍群分支。
G. maculatus 首先在巴塔哥尼亚中心/西北部地区多样化,然后通过连接太平洋和大西洋的南部沿海地区扩展其分布范围进入阿根廷。最近,北部种群之间的基因流动涉及最古老和最衍生的谱系,并且可能是在晚更新世的一次或多次冷却事件期间发生的排水逆转所促成的。总体而言,雌性有效种群规模代表了大约 0.5 Ma 以来广泛而增加了数百倍的最终结果,跨越了更新世的几次气候波动。冰川周期对 G. maculatus 遗传结构和多样性的影响较小,这可能反映了在多次全球冷却期间对海洋避难所的利用。在湖泊/河流之间检测到的遗传结构的细微差异很可能是生物属性(即洄游种群的居留非迁移行为和/或内陆化和出生地归巢)和科迪勒拉山脉作为扩散障碍的结果。