Takeda Hiroyuki, Goshima Naoki, Nomura Nobuo
Protein Expression Team, Japan Biological Information Research Center, Japan Biological Informatics Consortium, Tokyo, Japan.
Methods Mol Biol. 2010;627:131-45. doi: 10.1007/978-1-60761-670-2_8.
We have designed a novel high-throughput (HTP) kinase assay using an array-based surface plasmon resonance (SPR) apparatus. For high flexibility and performance, the kinase assay procedure is divided into an in vitro phosphorylation part and a phospho-detection part on a sensor chip. Not only biotinylated peptides but also recombinant proteins fused with FLAG-GST tandem tag can be used as native substrates. The substrate is selectively captured by a capture antibody immobilized on a sensor chip, and phospho-tyrosine (pTyr) residues are detected by an anti-pTyr antibody. The level of tyrosine phosphorylation is calculated from the capture level of the substrates and the binding level of the anti-pTyr antibody monitored by SPR. A wide dynamic range and real-time monitoring of SPR contribute to improved data reliability, and optimization of the procedure for an array-based apparatus achieved multiple sample processing (1,000 samples/day).
我们设计了一种新型的高通量激酶检测方法,该方法使用基于阵列的表面等离子体共振(SPR)仪器。为了实现高灵活性和高性能,激酶检测过程被分为传感器芯片上的体外磷酸化部分和磷酸化检测部分。不仅生物素化肽,而且与FLAG-GST串联标签融合的重组蛋白都可以用作天然底物。底物被固定在传感器芯片上的捕获抗体选择性捕获,磷酸化酪氨酸(pTyr)残基通过抗pTyr抗体进行检测。酪氨酸磷酸化水平由SPR监测的底物捕获水平和抗pTyr抗体的结合水平计算得出。SPR的宽动态范围和实时监测有助于提高数据可靠性,基于阵列仪器的程序优化实现了多样本处理(每天1000个样本)。