Duverger Eric, Lamerant-Fayel Nathalie, Frison Natacha, Monsigny Michel
Glycobiologie, Centre de Biophysique Moléculaire, CNRS et Université d'Orléans, Orléans, France.
Methods Mol Biol. 2010;627:157-78. doi: 10.1007/978-1-60761-670-2_10.
Surface plasmon resonance is a valuable tool to determine the affinity between glycoconjugates and sugar-binding proteins such as plant and animal lectins. The main interest of using such an approach is that neither the lectins - which are proteins - nor their ligands - natural compounds such as glycoproteins, oligosaccharides, polysaccharides, or synthetic glycoconjugates such as glycoclusters or neoglycoproteins - require any tag. Because lectins bear several binding sites, they behave like immunoglobulin eliciting avidity phenomena. This peculiarity may lead to erroneous results if special conditions are not applied. We obtained best and reproducible results when the lectin was immobilized and its ligands were used as soluble analytes. With heterogeneous glycoconjugates such as neoglycoproteins (which are heterogeneous in terms of nature, number, and position of sugar residues) or a mixture of oligosaccharides, the data may be more accurately gathered by using the Sips approach, which has been used to determine mean binding constants of polyclonal antibodies. With small analytes such as oligosaccharides, we found it convenient to determine binding constants by using an inhibitory approach: a neoglycoprotein (M (r) = approximately 80,000) was allowed to bind to the immobilized lectin and small oligosaccharides were used as inhibitors. With larger glycoconjugates such as peptides substituted with glycoclusters, direct binding measurements gave accurate results. Because of the availability of low-cost simple sugars (mono- or disaccharides) it is very convenient to use large concentrations of such carbohydrates to clean the sensor chips instead of more drastic cleaning solutions such as acids or alkali, in such a way that the immobilized lectin is stable for many experiments.
表面等离子体共振是一种用于确定糖缀合物与糖结合蛋白(如植物和动物凝集素)之间亲和力的重要工具。使用这种方法的主要优点在于,无论是作为蛋白质的凝集素,还是其配体(如糖蛋白、寡糖、多糖等天然化合物,或糖簇或新糖蛋白等合成糖缀合物)都无需任何标记。由于凝集素具有多个结合位点,它们的行为类似于引发亲和力现象的免疫球蛋白。如果不采用特殊条件,这种特性可能会导致错误的结果。当凝集素固定化且其配体用作可溶性分析物时,我们获得了最佳且可重复的结果。对于异质糖缀合物,如新糖蛋白(其糖残基的性质、数量和位置存在异质性)或寡糖混合物,使用Sips方法(已用于确定多克隆抗体的平均结合常数)可以更准确地收集数据。对于寡糖等小分子分析物,我们发现使用抑制法来确定结合常数很方便:使一种新糖蛋白(相对分子质量约为80,000)与固定化凝集素结合,并使用小寡糖作为抑制剂。对于较大的糖缀合物,如用糖簇取代的肽,直接结合测量可得到准确结果。由于低成本单糖或双糖易于获取,使用高浓度的此类碳水化合物来清洗传感器芯片非常方便,而无需使用诸如酸或碱等更剧烈的清洗溶液,这样固定化的凝集素在多次实验中都能保持稳定。