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可溶性蛋白和膜蛋白相图的测定。

Determination of the phase diagram for soluble and membrane proteins.

机构信息

Department of Chemical & Biomolecular Engineering, University of Illinois at Urbana-Champaign, Urbana, Illinois 61801, USA.

出版信息

J Phys Chem B. 2010 Apr 8;114(13):4432-41. doi: 10.1021/jp911780z.

Abstract

Methods to efficiently determine the phase behavior of novel proteins have the potential to significantly benefit structural biology efforts. Here, we present protocols to determine both the solubility boundary and the supersolubility boundary for protein/precipitant systems using an evaporation-based crystallization platform. This strategy takes advantage of the well-defined rates of evaporation that occur in this platform to determine the state of the droplet at any point in time without relying on an equilibrium-based end point. The dynamic nature of this method efficiently traverses phase space along a known path, such that a solubility diagram can be mapped out for both soluble and membrane proteins while using a smaller amount of protein than what is typically used in optimization screens. Furthermore, a variation on this method can be used to decouple crystal nucleation and growth events, so fewer and larger crystals can be obtained within a given droplet. The latter protocol can be used to rescue a crystallization trial where showers of tiny crystals were observed. We validated both of the protocols to determine the phase behavior and the protocol to optimize crystal quality using the soluble proteins lysozyme and ribonuclease A as well as the membrane protein bacteriorhodopsin.

摘要

高效确定新型蛋白质相行为的方法有可能极大地促进结构生物学的发展。在这里,我们介绍了使用基于蒸发的结晶平台来确定蛋白质/沉淀剂体系的溶解度边界和过饱和度边界的方案。该策略利用了该平台中发生的明确的蒸发速率,在不依赖基于平衡的终点的情况下确定液滴在任何时间点的状态。该方法的动态性质沿着已知路径有效地遍历相空间,因此可以在使用比优化筛选中通常使用的更少的蛋白质的情况下,为可溶性和膜蛋白绘制溶解度图。此外,这种方法的变体可用于分离晶体成核和生长事件,从而在给定的液滴中获得更少但更大的晶体。后一种方案可用于挽救结晶试验,其中观察到细小晶体的阵雨。我们使用可溶性蛋白质溶菌酶和核糖核酸酶 A 以及膜蛋白细菌视紫红质验证了这两种确定相行为的方案和优化晶体质量的方案。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/361d/2848416/ab0cdf2f7e28/jp-2009-11780z_0002.jpg

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