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高北极冰川前缘的细菌多样性。

Bacterial diversity in a glacier foreland of the high Arctic.

机构信息

Department of Biological Sciences, University of Idaho, Moscow, 83844, USA.

出版信息

Mol Ecol. 2010 Mar;19 Suppl 1:54-66. doi: 10.1111/j.1365-294X.2009.04479.x.

Abstract

Over the past 100 years, Arctic temperatures have increased at almost twice the global average rate. One consequence is the acceleration of glacier retreat, exposing new habitats that are colonized by microorganisms whose diversity and function are unknown. Here, we characterized bacterial diversity along two approximately parallel chronosequences in an Arctic glacier forefield that span six time points following glacier retreat. We assessed changes in phylotype richness, evenness and turnover rate through the analysis of 16S rRNA gene sequences recovered from 52 samples taken from surface layers along the chronosequences. An average of 4500 sequences was obtained from each sample by 454 pyrosequencing. Using parametric methods, it was estimated that bacterial phylotype richness was high, and that it increased significantly from an average of 4000 (at a threshold of 97% sequence similarity) at locations exposed for 5 years to an average of 7050 phylotypes per 0.5 g of soil at sites that had been exposed for 150 years. Phylotype evenness also increased over time, with an evenness of 0.74 for 150 years since glacier retreat reflecting large proportions of rare phylotypes. The bacterial species turnover rate was especially high between sites exposed for 5 and 19 years. The level of bacterial diversity present in this High Arctic glacier foreland was comparable with that found in temperate and tropical soils, raising the question whether global patterns of bacterial species diversity parallel that of plants and animals, which have been found to form a latitudinal gradient and be lower in polar regions compared with the tropics.

摘要

在过去的 100 年里,北极地区的气温上升速度是全球平均水平的两倍。其结果是冰川后退速度加快,暴露出了新的栖息地,这些栖息地被微生物殖民,而微生物的多样性和功能尚不清楚。在这里,我们描述了北极冰川前缘两条大致平行的定年序列中细菌的多样性,这些序列跨越了冰川后退后六个时间点。我们通过分析从定年序列表面层的 52 个样本中回收的 16S rRNA 基因序列,评估了系统发育丰富度、均匀度和周转率的变化。通过 454 焦磷酸测序,每个样本平均获得了 4500 个序列。使用参数方法,估计细菌系统发育丰富度较高,从暴露 5 年的平均 4000 个(在 97%序列相似性的阈值下)显著增加到暴露 150 年的平均 7050 个系统发育型/0.5g 土壤。系统发育均匀度也随时间增加,150 年来冰川后退的均匀度为 0.74,反映了大量稀有系统发育型的存在。暴露 5 年和 19 年的站点之间的细菌物种周转率特别高。这个高北极冰川前缘的细菌多样性水平与温带和热带土壤中的细菌多样性水平相当,这就提出了一个问题,即细菌物种多样性的全球模式是否与植物和动物的多样性模式平行,植物和动物的多样性模式已经发现形成了一个纬度梯度,并且在极地地区比在热带地区要低。

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