Department of Microbiology, Faculty of Public Health, Mahidol University, Bangkok, Thailand.
J Med Virol. 2010 May;82(5):854-60. doi: 10.1002/jmv.21746.
Noroviruses (NoVs) are recognized as a significant cause of acute gastroenteritis in children and adults. A 14-month study, from January 2006 to February 2007, was undertaken in a hospital in Thailand to determine the prevalence and genetic characterization of NoVs in patients of all ages with acute gastroenteritis. Based on reverse transcription-nested polymerase chain reaction (RT-nested PCR), NoVs were detected in 122 of 273 (44.7%) collected stool samples. Of the 122 NoV-positive samples, 28 (23%) belonged to GI, 79 (64.8%) belonged to GII, and 15 (12.2%) were mixed infections of GI and GII strains. Three NoV GI-positive and 42 NoV GII-positive samples were characterized successfully by DNA sequencing of the RT-nested PCR products and phylogenetic analysis. For NoV GI, two genotypes were identified: GI-2 (one sample) and GI-6 (two samples). NoV GII could be classified further into five distinct genotypes: GII-2 (1 sample), GII-3 (3 samples), GII-4 (14 samples), GII-6 (3 samples), and GII-17 (2 samples), and one unclassified genotype (19 samples). All NoV GII-4 strains showed 88-98% nucleotide identity with NoV GII-4 2006b variants reported worldwide. Among genotypes of NoV characterized, one co-infected stool sample exhibited NoVs GI-6 and GII-4 2006b. This study suggests that there is an important role of NoVs as etiologic agents in patients with acute gastroenteritis. The predominant circulating genotype of NoV infections is GII-4 2006b variant.
诺如病毒(NoV)被认为是导致儿童和成人急性肠胃炎的重要原因。2006 年 1 月至 2007 年 2 月,在泰国的一家医院进行了一项为期 14 个月的研究,旨在确定所有年龄段患有急性肠胃炎的患者中 NoV 的流行率和遗传特征。基于反转录套式聚合酶链反应(RT-nested PCR),在 273 份采集的粪便样本中,有 122 份(44.7%)检测到 NoV。在 122 份 NoV 阳性样本中,28 份(23%)属于 GI 型,79 份(64.8%)属于 GII 型,15 份(12.2%)为 GI 和 GII 型混合感染。通过 RT-nested PCR 产物的 DNA 测序和系统进化分析,成功对 3 份 NoV GI 阳性和 42 份 NoV GII 阳性样本进行了特征分析。对于 NoV GI,鉴定出两种基因型:GI-2(1 份样本)和 GI-6(2 份样本)。NoV GII 可进一步分为 5 种不同的基因型:GII-2(1 份样本)、GII-3(3 份样本)、GII-4(14 份样本)、GII-6(3 份样本)和 GII-17(2 份样本),以及一种未分类的基因型(19 份样本)。所有 NoV GII-4 株与全球报告的 NoV GII-4 2006b 变异株的核苷酸同一性为 88-98%。在所鉴定的 NoV 基因型中,一份混合感染的粪便样本同时显示出 NoVs GI-6 和 GII-4 2006b。本研究表明,NoV 作为急性肠胃炎患者的病原体具有重要作用。循环的主要 NoV 感染基因型是 GII-4 2006b 变异株。