Yew Zu Thur, Schlierf Michael, Rief Matthias, Paci Emanuele
Institute of Molecular and Cell Biology, University of Leeds, Leeds LS2 9JT, United Kingdom.
Phys Rev E Stat Nonlin Soft Matter Phys. 2010 Mar;81(3 Pt 1):031923. doi: 10.1103/PhysRevE.81.031923. Epub 2010 Mar 30.
The study of mechanical unfolding, through the combined efforts of atomic force microscopy and simulation, is yielding fresh insights into the free-energy landscapes of proteins. Thus far, experiments have been mostly analyzed with one-dimensional models of the free-energy landscape. We show that as the two ends of a protein, filamin, are pulled apart at a speed tending to zero, the measured mechanical strength plateaus at approximately 30 pN instead of going toward zero, deviating from the Bell model. The deviation can only be explained by a switch between parallel pathways. Insightful analysis of mechanical unfolding kinetics needs to account for the multidimensionality of the free-energy landscapes of proteins, which are crucial for understanding the behavior of proteins under the small forces experienced in vivo.
通过原子力显微镜和模拟的共同努力,对机械展开的研究正在为蛋白质的自由能景观带来新的见解。到目前为止,实验大多是用自由能景观的一维模型进行分析的。我们表明,当细丝蛋白的两端以趋于零的速度拉开时,测得的机械强度稳定在约30皮牛,而不是趋于零,这与贝尔模型不同。这种偏差只能通过平行路径之间的转换来解释。对机械展开动力学的深入分析需要考虑蛋白质自由能景观的多维性,这对于理解蛋白质在体内所经历的小力作用下的行为至关重要。