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长期施肥对稻田土壤中亚硝酸盐还原酶基因(nirK和nirS)多样性的影响

[Effect of long-term fertilization on the diversity of nitrite reductase genes (nirK and nirS) in paddy soil].

作者信息

Luo Xi-qian, Chen Zhe, Hu Rong-gui, Wu Min-na, Qin Hong-ling, Wei Wen-xue

机构信息

Key Laboratory for Agro-ecological Processes in Subtropical Region, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Changsha 410125, China.

出版信息

Huan Jing Ke Xue. 2010 Feb;31(2):423-30.

Abstract

In order to investigate the effects of long-term application of nitrogen fertilizer on soil denitrifying communities, the diversities of nir genes (nirK and nirS) were studied using molecular approaches in the long-term paddy field experiment (started in 1990) located in Taoyuan. Analysis of clone sequences indicated that the nirK fragments from paddy soil showed close similarity (90.7%) to the nirK sequences registered in GenBank database, but were not related to any known strain. Whereas, most of the airS clones showed low similarity (74.7%) to the nirS gene fragments registered in GenBank. The Chao1 estimates showed that the diversity of nirK gene 13) OTUs] than in N treatment [(49 +/- 9) OTUs], but the difference was not significant. However, application of nitrogen fertilizer resulted in significant difference of nirS-community compared to CK. Nitrogen fertilizer had obvious effect on tbe community structure of nirK-denitrifiers (p < 0.022), but the nirS-containing community was not affected. Based on phylogenetic analysis, nirK clones grouped into three clusters with aggregations of some OTUs cloned from N treatment. Although nirS clones grouped into four clusters, the majority of the clones were attributed in one cluster. The results suggested that application of nitrogen fertilizer had a greater influence on the diversity of nirS-containing bacterial community than that of the nirK. However, the community structure of nirK-containing denitrifiers was more sensitive to nitrogen fertilization than that of the mrS.

摘要

为了研究长期施用氮肥对土壤反硝化群落的影响,利用分子方法对位于桃源的长期稻田试验(始于1990年)中nir基因(nirK和nirS)的多样性进行了研究。克隆序列分析表明,稻田土壤中的nirK片段与GenBank数据库中登记的nirK序列相似度较高(90.7%),但与任何已知菌株均无关联。然而,大多数nirS克隆与GenBank中登记的nirS基因片段相似度较低(74.7%)。Chao1估计值表明,nirK基因的多样性在不施氮处理[(63±10)个操作分类单元(OTUs)]中高于施氮处理[(49±9)个OTUs],但差异不显著。然而,与对照相比,施用氮肥导致nirS群落存在显著差异。氮肥对nirK反硝化菌的群落结构有明显影响(p<0.022),但含nirS的群落未受影响。基于系统发育分析,nirK克隆分为三个簇,其中一些OTUs来自施氮处理的克隆聚集在一起。虽然nirS克隆分为四个簇,但大多数克隆归为一个簇。结果表明,施用氮肥对含nirS细菌群落多样性的影响大于nirK。然而,含nirK反硝化菌的群落结构比nirS对氮肥更敏感。

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