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马羧酸酯酶:3 号染色体上 6 个 CES1 和 4 个 CES 基因家族的证据。

Horse carboxylesterases: evidence for six CES1 and four families of CES genes on chromosome 3.

机构信息

Department of Genetics, Southwest Foundation for Biomedical Research, San Antonio, TX 78227, USA.

出版信息

Comp Biochem Physiol Part D Genomics Proteomics. 2009 Mar;4(1):54-65. doi: 10.1016/j.cbd.2008.10.004. Epub 2008 Nov 5.

Abstract

Carboxylesterases (CES) are responsible for the detoxification of a wide range of drugs and xenobiotics, and may contribute to cholesterol, fatty acid and lung surfactant metabolism. In this study, in silico methods were used to predict the amino acid sequences, secondary and tertiary structures, and gene locations for horse CES genes and encoded proteins, using data from the recently completed horse genome project. Evidence was obtained for six CES1 genes closely localised on horse chromosome 3, for which the predicted CES1 gene products are > or =74% identical. The horse genome also showed evidence for three other CES gene classes: CES5, located in tandem with the CES1 gene cluster; and CES2 and CES3, located more than 9 million base pairs downstream on chromosome 3. Horse CES2, CES3 and CES5 gene products shared 42-46% identity with each other, and with the CES1 protein subunits. Sequence alignments of these enzymes demonstrated key enzyme and family specific CES protein sequences reported for human CES1, CES2, CES3 and CES5. In addition, predicted secondary and tertiary structures for horse CES1, CES2, CES3 and CES5 subunits showed extensive conservation with human CES1. Phylogenetic analyses demonstrated the relationships and potential evolutionary origins of the horse CES sequences with previously reported sequences for human and other mammalian CES gene products. Several CES1 gene duplication events have apparently occurred following the appearance of the 'dawn' horse approximately 55 million years ago.

摘要

羧酸酯酶(CES)负责解毒广泛的药物和外源性化学物质,并可能参与胆固醇、脂肪酸和肺表面活性剂代谢。在这项研究中,利用最近完成的马基因组计划的数据,通过计算机模拟方法,预测了马 CES 基因和编码蛋白的氨基酸序列、二级和三级结构以及基因位置。在马染色体 3 上紧密定位的 6 个 CES1 基因得到了证实,这些预测的 CES1 基因产物的相似度大于等于 74%。马基因组还显示出其他 3 种 CES 基因类别的证据:CES5 与 CES1 基因簇串联定位;以及 CES2 和 CES3,位于染色体 3 下游超过 900 万个碱基对的位置。马 CES2、CES3 和 CES5 基因产物彼此之间以及与 CES1 蛋白亚基的相似度为 42-46%。对这些酶的序列比对表明,与人类 CES1、CES2、CES3 和 CES5 的关键酶和家族特异性 CES 蛋白序列一致。此外,马 CES1、CES2、CES3 和 CES5 亚基的预测二级和三级结构与人类 CES1 表现出广泛的保守性。系统发育分析表明,马 CES 序列与人类和其他哺乳动物 CES 基因产物的关系和潜在进化起源。大约 5500 万年前,“黎明马”出现后,CES1 基因发生了几次明显的重复事件。

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