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随机生化反应系统的灵敏度加和定理。

Sensitivity summation theorems for stochastic biochemical reaction systems.

机构信息

Department of Bioengineering, University of Washington, William H. Foege Building, Box 355061, Seattle, WA 98195-5061, USA.

出版信息

Math Biosci. 2010 Aug;226(2):109-19. doi: 10.1016/j.mbs.2010.04.004. Epub 2010 May 4.

Abstract

We investigate how stochastic reaction processes are affected by external perturbations. We describe an extension of the deterministic metabolic control analysis (MCA) to the stochastic regime. We introduce stochastic sensitivities for mean and covariance values of reactant concentrations and reaction fluxes and show that there exist MCA-like summation theorems among these sensitivities. The summation theorems for flux variances is shown to depend on the size of the measurement time window () within which reaction events are counted for measuring a single flux. It is found that the degree of the -dependency can become significant for processes involving multi-time-scale dynamics and is estimated by introducing a new measure of time-scale separation. This -dependency is shown to be closely related to the power-law scaling observed in flux fluctuations in various complex networks.

摘要

我们研究了随机反应过程如何受到外部干扰的影响。我们描述了将确定性代谢控制分析(MCA)扩展到随机状态的方法。我们引入了反应物浓度和反应通量的均值和协方差值的随机敏感性,并表明这些敏感性之间存在类似 MCA 的求和定理。通量方差的求和定理表明,它取决于用于测量单个通量的测量时间窗口()的大小。研究发现,对于涉及多时间尺度动力学的过程,这种对的依赖性可能变得非常显著,并通过引入一种新的时间尺度分离度量来进行估计。这种依赖性与在各种复杂网络中观察到的通量波动中的幂律标度密切相关。

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