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姜黄素类化合物作为硫氧还蛋白还原酶抑制剂:基于受体的药效团研究及活性位点的距离映射

Curcuminoids as inhibitors of thioredoxin reductase: a receptor based pharmacophore study with distance mapping of the active site.

作者信息

Singh Durg Vijay, Misra Krishna

机构信息

Deptartment of Bioinformatics, Indian Institute of information Technology, Deoghat Jhalwa, Allahabad 211012, India.

出版信息

Bioinformation. 2009 Oct 24;4(5):187-92. doi: 10.6026/97320630004187.

Abstract

Curcumin is the yellow pigment of turmeric that interacts irreversibly forming an adduct with thioredoxin reductase (TrxR), an enzyme responsible for redox control of cell and defence against oxidative stress. Docking at both the active sites of TrxR was performed to compare the potency of three naturally occurring curcuminoids, namely curcumin, demethoxy curcumin and bis-demethoxy curcumin. Results show that active sites of TrxR occur at the junction of E and F chains. Volume and area of both cavities is predicted. It has been concluded by distance mapping of the most active conformations that Se atom of catalytic residue SeCYS498, is at a distance of 3.56 from C13 of demethoxy curcumin at the E chain active site, whereas C13 carbon atom forms adduct with Se atom of SeCys 498. We report that at least one methoxy group in curcuminoids is necessary for interation with catalytic residues of thioredoxin. Pharmacophore of both active sites of the TrxR receptor for curcumin and demethoxy curcumin molecules has been drawn and proposed for design and synthesis of most probable potent antiproliferative synthetic drugs.

摘要

姜黄素是姜黄中的黄色色素,它与硫氧还蛋白还原酶(TrxR)不可逆地相互作用形成加合物,硫氧还蛋白还原酶是一种负责细胞氧化还原控制和抵御氧化应激的酶。对TrxR的两个活性位点进行对接,以比较三种天然存在的姜黄素类化合物,即姜黄素、去甲氧基姜黄素和双去甲氧基姜黄素的效力。结果表明,TrxR的活性位点出现在E链和F链的交界处。预测了两个腔的体积和面积。通过对最活跃构象的距离映射得出结论,催化残基SeCYS498的硒原子在E链活性位点处与去甲氧基姜黄素的C13相距3.56,而C13碳原子与SeCys 498的硒原子形成加合物。我们报告,姜黄素类化合物中至少有一个甲氧基对于与硫氧还蛋白的催化残基相互作用是必要的。已绘制出TrxR受体两个活性位点针对姜黄素和去甲氧基姜黄素分子的药效团,并提出用于设计和合成最可能有效的抗增殖合成药物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e76/2859574/8cc45bbf9eb5/97320630004187F1.jpg

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