Institut de Biologie Structurale J.-P. Ebel UMR 5075 CEA CNRS UJF, Grenoble, France.
Biophys J. 2010 May 19;98(10):2365-73. doi: 10.1016/j.bpj.2010.01.058.
Structure-function relationships in the tetrameric enzyme urate oxidase were investigated using pressure perturbation. As the active sites are located at the interfaces between monomers, enzyme activity is directly related to the integrity of the tetramer. The effect of hydrostatic pressure on the enzyme was investigated by x-ray crystallography, small-angle x-ray scattering, and fluorescence spectroscopy. Enzymatic activity was also measured under pressure and after decompression. A global model, consistent with all measurements, discloses structural and functional details of the pressure-induced dissociation of the tetramer. Before dissociating, the pressurized protein adopts a conformational substate characterized by an expansion of its substrate binding pocket at the expense of a large neighboring hydrophobic cavity. This substate should be adopted by the enzyme during its catalytic mechanism, where the active site has to accommodate larger intermediates and product. The approach, combining several high-pressure techniques, offers a new (to our knowledge) means of exploring structural and functional properties of transient states relevant to protein mechanisms.
使用压力扰动研究了四聚体酶尿酸氧化酶的结构-功能关系。由于活性位点位于单体之间的界面处,因此酶活性与四聚体的完整性直接相关。通过 X 射线晶体学、小角度 X 射线散射和荧光光谱法研究了静压对酶的影响。还在压力下和减压后测量了酶活性。与所有测量结果一致的全局模型揭示了四聚体压力诱导解离的结构和功能细节。在解离之前,受压蛋白质采用构象亚基,其特征是底物结合口袋扩张,而代价是大的相邻疏水腔。该亚基应该在酶的催化机制中被采用,其中活性位点必须容纳更大的中间体和产物。该方法结合了几种高压技术,为探索与蛋白质机制相关的瞬态状态的结构和功能特性提供了一种新的(据我们所知)方法。