Department of Sociology, University of Michigan, Ann Arbor, MI 48109, USA.
Epidemiology. 2010 Sep;21(5):711-8. doi: 10.1097/EDE.0b013e3181e5463a.
Secondary transmission after point-source outbreaks is an integral feature of the epidemiology of gastrointestinal pathogens such as norovirus. The household is an important site of these secondary cases. It can become the source of further community transmission as well as new point-source outbreaks. Consequently, time-series data from exposed households provide information for risk assessment and intervention.
Analysis of these data requires models that can address (1) dependencies in infection transmission, (2) random variability resulting from households with few members, and (3) unobserved state variables important to transmission. We use Monte Carlo maximum likelihood via data augmentation for obtaining estimates of the transmission rate and infectious period from household outbreaks with the 3 above features.
We apply this parameter estimation technique to 153 infection sequences within households from a norovirus outbreak in Sweden and obtain maximum likelihood estimates of the daily rate of transmission ([Greek small letter beta with circumflex accent] = 0.14, 95% confidence interval [CI] = 0.08-0.24) and average infectious period (1/[Greek small letter gamma with circumflex accent] = 1.17 days, 95% CI = 1.00-1.88). We also demonstrate the robustness of the estimates to missing household sizes and asymptomatic infections.
Maximum likelihood techniques such as these can be used to estimate transmission parameters under conditions of unobserved states and missing household size data, and to aid in the understanding of secondary risks associated with point-source outbreaks.
继发于点源暴发的二次传播是诺如病毒等胃肠道病原体流行病学的一个固有特征。家庭是这些继发病例的重要场所。它既可能成为进一步社区传播的源头,也可能引发新的点源暴发。因此,暴露家庭的时间序列数据为风险评估和干预提供了信息。
分析这些数据需要能够解决以下问题的模型:(1)感染传播的相关性,(2)由于家庭成员较少而导致的随机变异性,以及(3)对传播很重要的未观察状态变量。我们使用基于数据扩充的蒙特卡罗最大似然法来获得具有上述 3 个特征的家庭暴发中传播率和感染期的估计值。
我们将此参数估计技术应用于来自瑞典诺如病毒暴发的 153 个家庭内的感染序列,并获得了每日传播率的最大似然估计值([希腊小写字母β带扬抑符] = 0.14,95%置信区间[CI] = 0.08-0.24)和平均感染期(1/[希腊小写字母γ带扬抑符] = 1.17 天,95% CI = 1.00-1.88)。我们还证明了这些估计值对缺失的家庭规模和无症状感染的稳健性。
此类最大似然技术可用于在未观察状态和缺失家庭规模数据的条件下估计传播参数,并有助于理解与点源暴发相关的继发风险。