Institut Químic de Sarrià, Universitat Ramon Llull, Barcelona, Spain.
ChemMedChem. 2010 Aug 2;5(8):1272-81. doi: 10.1002/cmdc.201000124.
The CXCR4 receptor has been shown to interact with the human immunodeficiency virus (HIV) envelope glycoprotein gp120, leading to fusion of viral and cell membranes. Therefore, ligands that can attach to this receptor represent an important class of therapeutic agents against HIV, thus inhibiting the first step in the cycle of viral infection: the virus-cell entry/fusion. Herein we describe the in silico design, synthesis, and biological evaluation of novel monocyclam derivatives as HIV entry inhibitors. In vitro activity testing of these compounds in cell cultures against HIV strains revealed EC(50) values in the low micromolar range without cytotoxicity at the concentrations tested. Docking and molecular dynamics simulations were performed to predict the binding interactions between CXCR4 and the novel monocyclam derivatives. A binding mode of these compounds is proposed which is consistent with the main existing site-directed mutagenesis data on the CXCR4 co-receptor. Moreover, molecular modeling comparisons were performed between these novel monocyclams, previously reported non-cyclam compounds from which the monocyclams are derived, and the well-known AMD3100 bicyclam CXCR4 inhibitors. Our results suggest that these three structurally diverse CXCR4 inhibitors bind to overlapping but not identical amino acid residues in the transmembrane regions of the receptor.
趋化因子受体 4(CXCR4)已被证实可与人类免疫缺陷病毒(HIV)包膜糖蛋白 gp120 相互作用,导致病毒和细胞膜融合。因此,能够与该受体结合的配体代表了一类针对 HIV 的重要治疗药物,从而抑制了病毒感染周期的第一步:病毒-细胞进入/融合。在此,我们描述了新型单环酰胺衍生物作为 HIV 进入抑制剂的计算设计、合成和生物学评价。这些化合物在细胞培养物中针对 HIV 株的体外活性测试显示,在测试浓度下无细胞毒性的情况下,其 EC(50)值在低微摩尔范围内。进行了对接和分子动力学模拟,以预测 CXCR4 与新型单环酰胺衍生物之间的结合相互作用。提出了这些化合物的结合模式,该模式与 CXCR4 共受体的主要现有定点诱变数据一致。此外,还对这些新型单环酰胺、以前报道的衍生自单环酰胺的非环酰胺化合物以及众所周知的 AMD3100 双环酰胺 CXCR4 抑制剂进行了分子建模比较。我们的结果表明,这三种结构不同的 CXCR4 抑制剂与受体跨膜区的重叠但不相同的氨基酸残基结合。