Bard N, Bolze R, Caron E, Desprez F, Heymann M, Friedrich A, Moulinier L, Nguyen N H, Poch O, Toursel T
LIP, ENS Lyon, CNRS, INRIA, UCBL, France.
Stud Health Technol Inform. 2010;159:124-33.
Thanks to the availability of computational grids and their middleware, a seamless access to computation and storage resources is provided to application developers and scientists. The Décrypthon project is one example of such a high performance platform. In this paper, we present the architecture of the platform, the middleware developed to facilitate access to several servers deployed in France, and the data center for integrating large biological datasets over multiple sites, supported by a new query language and integration of various tools. The SM2PH project represents an example of a biological application that exploits the capacities of the Décrypthon grid. The goal of SM2PH is a better understanding of mutations involved in human monogenic diseases, their impact on the 3D structure of the protein and the subsequent consequences for the pathological phenotypes.
由于计算网格及其中间件的可用性,为应用程序开发人员和科学家提供了对计算和存储资源的无缝访问。Décrypthon项目就是这样一个高性能平台的例子。在本文中,我们介绍了该平台的架构、为便于访问部署在法国的多个服务器而开发的中间件,以及由一种新的查询语言和各种工具的集成所支持的用于跨多个站点集成大型生物数据集的数据中心。SM2PH项目是利用Décrypthon网格能力的生物应用的一个例子。SM2PH的目标是更好地理解人类单基因疾病中涉及的突变、它们对蛋白质三维结构的影响以及对病理表型的后续影响。