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Manipulation of FASTQ data with Galaxy.
Bioinformatics. 2010 Jul 15;26(14):1783-5. doi: 10.1093/bioinformatics/btq281. Epub 2010 Jun 18.
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Making whole genome multiple alignments usable for biologists.
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3
mod_bio: Apache modules for Next-Generation sequencing data.
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4
NGSUtils: a software suite for analyzing and manipulating next-generation sequencing datasets.
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The missing graphical user interface for genomics.
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IWTomics: testing high-resolution sequence-based 'Omics' data at multiple locations and scales.
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fastQ_brew: module for analysis, preprocessing, and reformatting of FASTQ sequence data.
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Streamlined analysis of duplex sequencing data with Du Novo.
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Quality control and preprocessing of metagenomic datasets.
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2
DAXX-dependent H3.3 deposition maintains myoblast cell identity independently of other histone chaperone complexes.
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Draft genome sequence of a multidrug-resistant O13/O129:H11 isolate from imported beef in Saudi Arabia.
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Analysis of Essential Genes in by CRISPRi and Tn-seq.
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The genetic interaction map of the human solute carrier superfamily.
Mol Syst Biol. 2025 May 12. doi: 10.1038/s44320-025-00105-5.
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Genotypic Characterization of (ISKNV) in Southeast Asian Aquaculture.
Transbound Emerg Dis. 2023 Mar 21;2023:6643006. doi: 10.1155/2023/6643006. eCollection 2023.
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Identity and timing of protist inoculation affect plant performance largely irrespective of changes in the rhizosphere microbial community.
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Prediction of Single-Mutation Effects for Fluorescent Immunosensor Engineering with an End-to-End Trained Protein Language Model.
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本文引用的文献

1
Galaxy: a web-based genome analysis tool for experimentalists.
Curr Protoc Mol Biol. 2010 Jan;Chapter 19:Unit 19.10.1-21. doi: 10.1002/0471142727.mb1910s89.
2
The Sanger FASTQ file format for sequences with quality scores, and the Solexa/Illumina FASTQ variants.
Nucleic Acids Res. 2010 Apr;38(6):1767-71. doi: 10.1093/nar/gkp1137. Epub 2009 Dec 16.
3
Using galaxy to perform large-scale interactive data analyses.
Curr Protoc Bioinformatics. 2007 Sep;Chapter 10:Unit 10.5. doi: 10.1002/0471250953.bi1005s19.

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